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      KCI등재 SCIE SCOPUS

      Phytochemical profiles of Brassicaceae vegetables and their multivariate characterization using chemometrics

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      https://www.riss.kr/link?id=A106055083

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      다국어 초록 (Multilingual Abstract)

      Twenty-eight metabolites were extracted from nine Brassicaceae of Korean origin (broccoli, Brussels sprouts, cabbage, Chinese cabbage, kale, kohlrabi, pak choi, radish sprouts, and red cabbage) and analyzed using gas chromatography–mass spectrometry and high-performance liquid chromatography. Principal components analysis (PCA), orthogonal projection to latent structurediscriminant analysis (OPLS-DA), Pearson’s correlation analysis, hierarchical clustering analysis (HCA), and batch learning self-organizing map analysis (BL-SOM) were used to visualize metabolite pattern differences among Brassicaceae samples. The PCA score plots from the metabolic data sets provided a clear distinction between Brassica species and radish sprouts (genus Raphanus L.).
      Additionally, B. oleracea L. varieties were differentiated from B. rapa L. varieties by PCA and OPLS-DA score plots. HCA and BL-SOM of these metabolites clustered metabolites that are metabolically related. This study demonstrates that plants’ characterization by multivariate statistical analysis using metabolic profiling allows distinguishing their phenotypes and identifying desired characteristics.
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      Twenty-eight metabolites were extracted from nine Brassicaceae of Korean origin (broccoli, Brussels sprouts, cabbage, Chinese cabbage, kale, kohlrabi, pak choi, radish sprouts, and red cabbage) and analyzed using gas chromatography–mass spectrometry...

      Twenty-eight metabolites were extracted from nine Brassicaceae of Korean origin (broccoli, Brussels sprouts, cabbage, Chinese cabbage, kale, kohlrabi, pak choi, radish sprouts, and red cabbage) and analyzed using gas chromatography–mass spectrometry and high-performance liquid chromatography. Principal components analysis (PCA), orthogonal projection to latent structurediscriminant analysis (OPLS-DA), Pearson’s correlation analysis, hierarchical clustering analysis (HCA), and batch learning self-organizing map analysis (BL-SOM) were used to visualize metabolite pattern differences among Brassicaceae samples. The PCA score plots from the metabolic data sets provided a clear distinction between Brassica species and radish sprouts (genus Raphanus L.).
      Additionally, B. oleracea L. varieties were differentiated from B. rapa L. varieties by PCA and OPLS-DA score plots. HCA and BL-SOM of these metabolites clustered metabolites that are metabolically related. This study demonstrates that plants’ characterization by multivariate statistical analysis using metabolic profiling allows distinguishing their phenotypes and identifying desired characteristics.

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      참고문헌 (Reference)

      1 Kim JK, "Variation and correlation analysis of flavonoids and carotenoids in Korean pigmented rice (Oryza sativa L.) cultivars" 58 : 12804-12809, 2010

      2 Kohonen T, "The self-organizing map" 78 : 1464-1480, 1990

      3 Young AJ, "The photoprotective role of carotenoids in higher plants" 83 : 702-708, 1991

      4 Fonville JM, "The evolution of partial least squares models and related chemometric approaches in metabonomics and metabolic phenotyping" 24 : 636-649, 2010

      5 Arigoni D, "Terpenoid biosynthesis from 1-deoxy-D-xylulose in higher plants by intramolecular skeletal rearrangement" 94 : 10600-10605, 1997

      6 Kohonen T, "Self-organized formation of topologically correct feature maps" 43 : 59-69, 1982

      7 Howard LA, "Retention of phytochemicals in fresh and processed broccoli" 62 : 1098-1100, 1997

      8 Messerli G, "Rapid classification of phenotypic mutants of Arabidopsis via metabolite fingerprinting" 143 : 1484-1492, 2007

      9 Pongsuwan W, "Prediction of Japanese green tea ranking by gas chromatography/mass spectrometry-based hydrophilic metabolite fingerprinting" 55 : 231-236, 2007

      10 Eriksson L, "Multi- and megavariate data analysis principles and applications" Umetrics AB 2001

      1 Kim JK, "Variation and correlation analysis of flavonoids and carotenoids in Korean pigmented rice (Oryza sativa L.) cultivars" 58 : 12804-12809, 2010

      2 Kohonen T, "The self-organizing map" 78 : 1464-1480, 1990

      3 Young AJ, "The photoprotective role of carotenoids in higher plants" 83 : 702-708, 1991

      4 Fonville JM, "The evolution of partial least squares models and related chemometric approaches in metabonomics and metabolic phenotyping" 24 : 636-649, 2010

      5 Arigoni D, "Terpenoid biosynthesis from 1-deoxy-D-xylulose in higher plants by intramolecular skeletal rearrangement" 94 : 10600-10605, 1997

      6 Kohonen T, "Self-organized formation of topologically correct feature maps" 43 : 59-69, 1982

      7 Howard LA, "Retention of phytochemicals in fresh and processed broccoli" 62 : 1098-1100, 1997

      8 Messerli G, "Rapid classification of phenotypic mutants of Arabidopsis via metabolite fingerprinting" 143 : 1484-1492, 2007

      9 Pongsuwan W, "Prediction of Japanese green tea ranking by gas chromatography/mass spectrometry-based hydrophilic metabolite fingerprinting" 55 : 231-236, 2007

      10 Eriksson L, "Multi- and megavariate data analysis principles and applications" Umetrics AB 2001

      11 Disch A, "Mevalonatederived isopentenyl diphosphate is the biosynthetic precursor of ubiquinone prenyl side chain in tobacco BY-2 cells" 331 : 615-621, 1998

      12 김연복, "Metabolomics of differently colored Gladiolus cultivars" 한국응용생명화학회 59 (59): 597-607, 2016

      13 Park SY, "Metabolite profiling approach reveals the interface of primary and secondary metabolism in colored cauliflowers (Brassica oleracea L. ssp. botrytis)" 61 : 6999-7007, 2013

      14 Park WT, "Metabolic profiling of glucosinolates, anthocyanins, carotenoids, and other secondary metabolites in kohlrabi (Brassica oleracea var. gongylodes)" 60 : 8111-8116, 2012

      15 Baek SA, "Metabolic profiling in Chinese cabbage (Brassica rapa L. subsp. pekinensis) cultivars reveals that glucosinolate content is correlated with carotenoid content" 64 : 4426-4434, 2016

      16 Hirai MY, "Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana" 101 : 10205-10210, 2004

      17 박수연, "Identification and Quantification of Carotenoids in Paprika Fruits and Cabbage, Kale, and Lettuce Leaves" 한국응용생명화학회 57 (57): 355-358, 2014

      18 Kumar S, "Health promoting bioactive phytochemicals from Brassica" 19 : 141-152, 2012

      19 Salunkhe DK, "Handbook of vegetable science and technology: production, composition. Storage and Processing" Marcel Dekker Inc 533-538, 1998

      20 Goodacre R, "From phenotype to genotype: whole tissue profiling for plant breeding" 3 : 489-501, 2007

      21 Jumtee K, "Fast GC-FID based metabolic fingerprinting of Japanese green tea leaf for its quality ranking prediction" 32 : 2296-2304, 2009

      22 Kohonen T, "Engineering applications of the self-organizing map" 84 : 1358-1384, 1996

      23 Iniguez-Luy FL, "Development of a set of public SSR markers derived from genomic sequence of a rapid cycling Brassica oleracea L. genotype" 117 : 977-985, 2008

      24 김태진, "Determination of lipophilic metabolites for species discrimination and quality assessment of nine leafy vegetables" 한국응용생명화학회 58 (58): 909-918, 2015

      25 Laule O, "Crosstalk between cytosolic and plastidial pathways of isoprenoid biosynthesis in Arabidopsis thaliana" 100 : 6866-6871, 2003

      26 Kim JK, "Comparative metabolic profiling of pigmented rice (Oryza sativa L.) cultivars reveals primary metabolites are correlated with secondary metabolites" 57 : 14-20, 2013

      27 Femina A, "Cauliflower (Brassica oleracea L.), globe artichoke (Cynara scolymus L.) and chicory witloof (Cichorium intybus L.) processing by-products as source of dietary fibre" 77 : 511-518, 1998

      28 Kanaya S, "Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome" 276 : 89-99, 2001

      29 김재광, "Analysis of Metabolite Profile Data Using Batch-Learning Self-Organizing Maps" 한국식물학회 50 (50): 517-521, 2007

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2015-12-30 학술지명변경 한글명 : Journal of the Korean Society for Applied Biological Chemistry -> Applied Biological Chemistry
      외국어명 : Journal of the Korean Society for Applied Biological Chemistry -> Applied Biological Chemistry
      KCI등재
      2010-05-06 학술지명변경 한글명 : 한국응용생명화학회지 -> Journal of the Korean Society for Applied Biological Chemistry KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2004-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2001-07-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.81 0.21 0.61
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.49 0.43 0.422 0.06
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