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      Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea

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      https://www.riss.kr/link?id=A106880234

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      다국어 초록 (Multilingual Abstract)

      In 2019, after a comprehensive investigation of indigenous prokaryotic species in Korea, a total of 12 bacterial strains assigned to the phylum Proteobacteria were isolated from soil. With the high 16S rRNA gene sequence similarity (>98.8%) and for...

      In 2019, after a comprehensive investigation of indigenous prokaryotic species in Korea, a total of 12 bacterial strains assigned to the phylum Proteobacteria were isolated from soil. With the high 16S rRNA gene sequence similarity (>98.8%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent, predefined bacterial species. This study identified two species in the family Burkholderiaceae, one species in the family Comamonadaceae, two species in the family Oxalobacteraceae, one species in the family Micrococcaceae, one species in the family Bradyrhizobiaceae, one species in the family Methylobacteriaceae, one species in the family Rhizobiaceae, one species in the family Rhodocyclaceae, and one species in the family Sphingomonadaceae. There is no official report about these 12 species in Korea, so are described as unreported bacterial species in Korea in this study. Gram reaction, basic biochemical characteristics, colony, and cell morphology are also described in the species description section.

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      참고문헌 (Reference)

      1 Gupta, R.S., "The phylogeny of proteobacteria : relationships to other eubacterial phyla and eukaryotes" 24 (24): 367-402, 2000

      2 Kimura, M., "The neutral theory of molecular evolution" Cambridge University Press 1983

      3 Saitou, N., "The neighbor-joining method : a new method for reconstructing phylogenetic trees" 4 : 406-425, 1987

      4 Kersters, K., "The Prokaryotes" Springer 2006

      5 Stackebrandt, E., "Proteobacteria classis nov., a name for the phylogenetic taxon that includes the “purple bacteria and their relatives.”" 38 : 321-325, 1988

      6 Kumar, S., "MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datadets" 33 : 1870-1874, 2016

      7 Kim, O. S., "Introducing EzTaxon-e : a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species" 62 : 716-721, 2012

      8 Hirsch, P., "Hymenobacter roseosalivarius gen. nov., sp. nov. from continental Antartica soils and sandstone : bacteria of the Cytophaga/Flavobacterium/Bacteroides line of phylogenetic descent" 21 : 374-383, 1998

      9 Im, W. T., "Deinococcus aquaticus sp. nov., isolated from fresh water, and Deinococcus caeni sp. nov., isolated from activated sludge" 58 : 2348-2353, 2008

      10 Selvam, K., "DdrA, DdrD, and PprA: components of UV and mitomycin C resistance in Deinococcus radiodurans R1" 8 (8): e69007-, 2013

      1 Gupta, R.S., "The phylogeny of proteobacteria : relationships to other eubacterial phyla and eukaryotes" 24 (24): 367-402, 2000

      2 Kimura, M., "The neutral theory of molecular evolution" Cambridge University Press 1983

      3 Saitou, N., "The neighbor-joining method : a new method for reconstructing phylogenetic trees" 4 : 406-425, 1987

      4 Kersters, K., "The Prokaryotes" Springer 2006

      5 Stackebrandt, E., "Proteobacteria classis nov., a name for the phylogenetic taxon that includes the “purple bacteria and their relatives.”" 38 : 321-325, 1988

      6 Kumar, S., "MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datadets" 33 : 1870-1874, 2016

      7 Kim, O. S., "Introducing EzTaxon-e : a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species" 62 : 716-721, 2012

      8 Hirsch, P., "Hymenobacter roseosalivarius gen. nov., sp. nov. from continental Antartica soils and sandstone : bacteria of the Cytophaga/Flavobacterium/Bacteroides line of phylogenetic descent" 21 : 374-383, 1998

      9 Im, W. T., "Deinococcus aquaticus sp. nov., isolated from fresh water, and Deinococcus caeni sp. nov., isolated from activated sludge" 58 : 2348-2353, 2008

      10 Selvam, K., "DdrA, DdrD, and PprA: components of UV and mitomycin C resistance in Deinococcus radiodurans R1" 8 (8): e69007-, 2013

      11 Felsenstein, J., "Confidence limits on phylogenies : an approach using the bootstrap" 39 : 783-791, 1985

      12 Wragg, P., "Comparison of Biolog GEN III MicroStation semi-automated bacterial identification system with matrix-assisted laser desorption ionization-time of flightmass spectrometry and 16S ribosomal RNA gene sequencing for the identification of bacteria of veterinary interest" 105 : 16-21, 2014

      13 Hall, T.A., "BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT" Information Retrieval Ltd 1999

      14 Garrity, G. M., "Bergey’s Manual of Systematic Bacteriology" Springer 2005

      15 Woese, CR, "Bacterial evolution" 51 (51): 221-271, 1987

      16 Weisburg, W. G., "16S ribosomal DNA amplification for phylogenetic study" 173 : 697-703, 1991

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2028 평가예정 재인증평가 신청대상 (재인증)
      2022-01-01 평가 등재학술지 유지 (재인증) KCI등재
      2019-01-01 평가 등재학술지 선정 (계속평가) KCI등재
      2018-01-01 평가 등재후보학술지 유지 (계속평가) KCI등재후보
      2017-01-01 평가 등재후보학술지 유지 (계속평가) KCI등재후보
      2015-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0 0 0
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
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