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      Molecular Docking Study of Anti-diabetic Xanthones from Garcinia Xanthochymus

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      https://www.riss.kr/link?id=A103630272

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      다국어 초록 (Multilingual Abstract)

      Diabetes mellitus has become a major growing public health problem worldwide. More than 90% of all diabetes cases are classified as type 2 diabetes (T2D), which is also known as non-insulin dependent diabetes. Protein tyrosine phosphatase 1B (PTP1B) plays an important role in the negative regulation of insulin signal transduction pathway and has emerged as novel therapeutic strategy for the treatment of type 2 diabetes. PTP1B inhibitors enhance the sensibility of insulin receptor (IR) and have favorable curing effect for insulin resistance-related diseases. Recently twelve anti-diabetic xanthones were isolated from the bark of Garcinia xanthochymus. Hence, in the present study, molecular docking was carried out for these twelve xanthones. The objective of this work is to study the interaction of the newly isolated xanthones with PTP1B. The docking results showed that xanthones have good interactions and has better docking score with PTP1B and suggest LYS120 and ASP181 are the important residues involved in interaction between PTP1B enzyme and the xanthones.
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      Diabetes mellitus has become a major growing public health problem worldwide. More than 90% of all diabetes cases are classified as type 2 diabetes (T2D), which is also known as non-insulin dependent diabetes. Protein tyrosine phosphatase 1B (PTP1B) p...

      Diabetes mellitus has become a major growing public health problem worldwide. More than 90% of all diabetes cases are classified as type 2 diabetes (T2D), which is also known as non-insulin dependent diabetes. Protein tyrosine phosphatase 1B (PTP1B) plays an important role in the negative regulation of insulin signal transduction pathway and has emerged as novel therapeutic strategy for the treatment of type 2 diabetes. PTP1B inhibitors enhance the sensibility of insulin receptor (IR) and have favorable curing effect for insulin resistance-related diseases. Recently twelve anti-diabetic xanthones were isolated from the bark of Garcinia xanthochymus. Hence, in the present study, molecular docking was carried out for these twelve xanthones. The objective of this work is to study the interaction of the newly isolated xanthones with PTP1B. The docking results showed that xanthones have good interactions and has better docking score with PTP1B and suggest LYS120 and ASP181 are the important residues involved in interaction between PTP1B enzyme and the xanthones.

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      참고문헌 (Reference)

      1 Y. Sahisgo, "β-Cell dysfunction : its critical role in prevention and management of type 2 diabetes" 6 : 109-124, 2015

      2 J. Montalibet, "Therapeutic strategies for targeting PTP1B in diabetes" 2 : 129-135, 2005

      3 "The PyMOL Molecular Graphics System, Version 1.7.4 Schrödinger" LLC

      4 A. N Jain, "Scoring non-covalent protein-ligand interactions : a continuous differentiable function tuned to compute binding" 10 : 427-440, 1996

      5 A. N. Jain, "Scoring functions for protein-ligand docking" 7 : 407-420, 2006

      6 "SYBYL Software"

      7 A. M. Patel, "Role of protein tyrosine phosphatase-1B inhibitors in type 2 diabetes mellitus" 4 : 1-5, 2014

      8 H. Cho, "Protein tyrosine phosphatase 1B(PTP1B)and obesity" 91 : 405-424, 2013

      9 Z. -Y. Zhang, "PTP1B inhibitors as potential therapeutics in the treatment of type 2 diabetes and obesity" 12 : s223-s233, 2003

      10 N. K. Tonks, "PTP1B : from the sidelines to the front lines!" 546 : 140-148, 2003

      1 Y. Sahisgo, "β-Cell dysfunction : its critical role in prevention and management of type 2 diabetes" 6 : 109-124, 2015

      2 J. Montalibet, "Therapeutic strategies for targeting PTP1B in diabetes" 2 : 129-135, 2005

      3 "The PyMOL Molecular Graphics System, Version 1.7.4 Schrödinger" LLC

      4 A. N Jain, "Scoring non-covalent protein-ligand interactions : a continuous differentiable function tuned to compute binding" 10 : 427-440, 1996

      5 A. N. Jain, "Scoring functions for protein-ligand docking" 7 : 407-420, 2006

      6 "SYBYL Software"

      7 A. M. Patel, "Role of protein tyrosine phosphatase-1B inhibitors in type 2 diabetes mellitus" 4 : 1-5, 2014

      8 H. Cho, "Protein tyrosine phosphatase 1B(PTP1B)and obesity" 91 : 405-424, 2013

      9 Z. -Y. Zhang, "PTP1B inhibitors as potential therapeutics in the treatment of type 2 diabetes and obesity" 12 : s223-s233, 2003

      10 N. K. Tonks, "PTP1B : from the sidelines to the front lines!" 546 : 140-148, 2003

      11 Sathya Babu, "Molecular Docking Study of Naturally-derived Neuraminidase Inhibitors Isolated from Phellinus Baumii" 기초과학연구원 8 (8): 209-213, 2015

      12 F. Perveen, "Investigations of drug–DNA interactions using molecular docking, cyclic voltammetry and UV–Vis spectroscopy" 1004 : 67-73, 2011

      13 "IDF diabetes atlas" International Diabetes Federation 2015

      14 World Health Organization, "Health topics. Diabetes. Fact sheet n 312" 2013

      15 Changdev G. Gadhe, "Comparative Modeling of Human P-gp NBD2 and Docking and Binding Mode Analysis of 8-Geranyl Chrysin as a P-gp Modulator" 기초과학연구원 5 (5): 18-21, 2012

      16 M. E. Cerf, "Beta cell dysfunction and insulin resistance" 4 : 2013

      17 C. N. Nguyen, "Anti-diabetic xanthones from the bark of Garcinia xanthochymus" 27 : 3301-3304, 2017

      18 "About diabetes" World Health Organization 2014

      19 Thirumurthy Madhavan, "A Docking Study of Newly Found Natural Neuraminidase Inhibitor: Erystagallin A" 기초과학연구원 4 (4): 273-277, 2011

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2022 평가예정 신규평가 신청대상 (신규평가)
      2021-12-01 평가 등재후보 탈락 (계속평가)
      2020-12-01 평가 등재후보로 하락 (재인증) KCI등재후보
      2017-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2013-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2012-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2010-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.45 0.45 0.35
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.28 0.25 0.24 0.05
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