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      KCI등재 SCOPUS

      Rapid Discrimination of F1Hybrid Seeds from Their Parental Lines and Selection of Protein-Rich Corn Lines forSilage Corn Breeding Using FT-IR Spectroscopy Combined by Multivariate Analysis

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      https://www.riss.kr/link?id=A104993357

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      다국어 초록 (Multilingual Abstract)

      This study aims to establish the discrimination of F1 hybrid seeds from their parental lines and rapid selection of proteinrich lines from inbreeding lines of corn using FT-IR spectroscopy combined by multivariate analysis. Eight individual seeds from...

      This study aims to establish the discrimination of F1 hybrid seeds from their parental lines and rapid selection of proteinrich lines from inbreeding lines of corn using FT-IR spectroscopy combined by multivariate analysis. Eight individual seeds from the maternal and paternal lines of Gwangpyeongok and their F1 progeny seeds were subjected to FT-IR spectroscopy. A total of 176 corn inbreeding lines including commercial corn cultivars were subjected to FT-IR spectroscopy. To establish the prediction model for total protein content from corn seed, 33 corn inbreeding lines out of 176 were randomly selected and total seed protein contents using Bradford assay were examined. PLS-DA (partial least square regression discriminant analysis) could clearly discriminate F1 hybrid seeds from their parental lines. PC (principal component) loading values show that 1,700 1,500 cm-1 and 1,200 - 900 cm-1 regions of FT-IR spectra are significantly important for discrimination of corn lines. The prediction model for total protein contents was established by PLS (partial least square regression) algorithm, and its accuracy was confirmed by cross-validation test (R2 = 0.94). After external validation fromexternal 25 corn inbreeding lines, regression coefficient (R2) was 0.78 which indicated that the prediction model had relatively good accuracy. Thus, considering these results we suggest that FT-IR combined with multivariate analysis could be applied as a novel tool for high-throughput screening of F1 hybrid seeds from their parental lines and protein-rich lines for breeding of silage corn cultivar.

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      참고문헌 (Reference)

      1 Kos G., "Validation of chemometric models for determination of deoxynivalenolon maize by mid-infrared spectroscopy" 19 : 149-153, 2003

      2 D’Souza L., "Use of Fourier Transform Infrared(FTIR)Spectroscopy to Study Cadmium-Induced Changes in Padina Tetrastromatica(Hauck)" 3 : 135-143, 2008

      3 Dumas P., "The use of synchrotron infrared microspectroscopy in biological and biomedical investigations" 32 : 3-21, 2003

      4 Lutz W., "The end of world population growth" 412 : 543-545, 2001

      5 Kim SW., "Taxonomic discrimination of higher plants by multivariate analysis of Fourier transform infrared spectroscopy data" 23 : 246-250, 2004

      6 GoodacreR., "Rapid identification of urinary tract infection bacteria using hyperspectral wholeorganism fingerprinting and artificial neural networks" 144 : 1157-1170, 1998

      7 Suk Weon Kim, "Rapid discrimination of commercial strawberry cultivars using Fourier transform infrared spectroscopy data combined by multivariate analysis" 한국식물생명공학회 3 (3): 87-93, 2009

      8 Leopold LF., "Quantification of carbohydrates in fruit juices using FTIR spectroscopy and multivariate analysis" 26 : 93-104, 2011

      9 Terhoeven-Urselmans T., "Prediction of soil fertility properties from a globally distributed soil mid-infrared spectral library" 74 : 1792-1799, 2010

      10 Marinovic S., "Prediction of diesel fuel properties by vibrational spectroscopy using multivariate analysis" 67 : 939-949, 2012

      1 Kos G., "Validation of chemometric models for determination of deoxynivalenolon maize by mid-infrared spectroscopy" 19 : 149-153, 2003

      2 D’Souza L., "Use of Fourier Transform Infrared(FTIR)Spectroscopy to Study Cadmium-Induced Changes in Padina Tetrastromatica(Hauck)" 3 : 135-143, 2008

      3 Dumas P., "The use of synchrotron infrared microspectroscopy in biological and biomedical investigations" 32 : 3-21, 2003

      4 Lutz W., "The end of world population growth" 412 : 543-545, 2001

      5 Kim SW., "Taxonomic discrimination of higher plants by multivariate analysis of Fourier transform infrared spectroscopy data" 23 : 246-250, 2004

      6 GoodacreR., "Rapid identification of urinary tract infection bacteria using hyperspectral wholeorganism fingerprinting and artificial neural networks" 144 : 1157-1170, 1998

      7 Suk Weon Kim, "Rapid discrimination of commercial strawberry cultivars using Fourier transform infrared spectroscopy data combined by multivariate analysis" 한국식물생명공학회 3 (3): 87-93, 2009

      8 Leopold LF., "Quantification of carbohydrates in fruit juices using FTIR spectroscopy and multivariate analysis" 26 : 93-104, 2011

      9 Terhoeven-Urselmans T., "Prediction of soil fertility properties from a globally distributed soil mid-infrared spectral library" 74 : 1792-1799, 2010

      10 Marinovic S., "Prediction of diesel fuel properties by vibrational spectroscopy using multivariate analysis" 67 : 939-949, 2012

      11 Lopez-Sanchez M., "Olive fruit growth and ripening as seen by vibrational spectroscopy" 58 : 82-87, 2010

      12 Martens H., "Multivariate Calibration" John Wiley and Sons 1989

      13 Bryan GH., "Molecular genetic approaches to developing quality protein maize" 21 : 227-233, 2005

      14 Scibisz I., "Mid-infrared spectroscopy as a tool for rapid determination of internal quality parameters in tomato" 125 : 1390-1397, 2011

      15 Shewry PR., "Methods in Molecular Biology-Plant Gene Transfer and Expression Protocols (v 49)" Humana Press 423-437, 1995

      16 Krishnan P., "Metabolite fingerprinting and profiling in plants using NMR" 56 : 255-265, 2005

      17 Schulz H., "Identification and quantification of valuable plant substances by IR and Raman spectroscopy" 43 : 13-25, 2007

      18 Wenning M., "Fourier-transform infrared microspectroscopy, a novel and rapid tool for identification of yeasts" 68 : 4717-4721, 2002

      19 Stewart D., "Fourier-transform infrared and Raman spectroscopic evidence for the incorporation of cinnamaldehydes into the lignin of transgenic tobacco(Nicotiana tabacum L.)plants with reduced expression of cinnamyl alcohol dehydrogenase" 201 : 311-318, 1997

      20 Song SY., "Fourier Transform Infrared(FT-IR)spectroscopy of genomic DNA to discriminate F1 progenies from their paternal lineage of Chinese cabbage(Brassica rapa subsp. pekinensis)" 33 : 453-464, 2014

      21 Hyun YH., "Food material" Hyungseunl Publishing Co 55-57, 2008

      22 Baye TM., "Development of a calibration to predict maize seed composition using single kernel near infrared spectroscopy" 43 : 236-243, 2006

      23 Liu Y., "Comparison of the HPLC method and FT-NIR analysis for quantification of glucose, fructose, and sucrose in intact apple fruits" 54 : 2810-2815, 2006

      24 Luca MD., "Classification of morocacan olive cultivars by linear discriminant analysis appleid to ATR-FT-IR spectra of endocarps" 47 : 1286-1292, 2012

      25 Monferrere GL., "Chemometric characterization of sunflower seeds" 77 : 1018-1022, 2012

      26 Parker FS., "Applications of infrared, raman and resonance raman spectroscopy in biochemistry" Plenum Press 527-, 1983

      27 Lebot V., "Application of near infrared reflectance spectroscopy for the evaluation of yam(Dioscoreaalata)germplasm and breeding lines" 93 : 1788-1797, 2013

      28 Kohavi R., "A study of cross-validation and bootstrap for accuracy estimation and model selection" 2 : 1137-1145, 1995

      29 Chen L., "A rapid method to screen for cell-wall mutants using discriminant analysis of fourier transformation infrared spectra" 16 : 385-392, 1998

      30 Bradford MM., "A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding" 72 : 248-254, 1976

      31 Wolkers WF., "A Fourier transform infrared spectroscopy study of sugar glasses" 339 : 1077-1085, 2004

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2016-04-01 평가 SCOPUS 등재 (기타) KCI등재
      2015-12-01 평가 등재후보로 하락 (기타) KCI등재후보
      2011-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2010-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2008-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.09 0.09 0.11
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.12 0.11 0.226 0.05
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