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      KCI등재 SCIE SCOPUS

      Development of a real-time loop-mediated isothermal amplification method for the detection of severe fever with thrombocytopenia syndrome virus

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      https://www.riss.kr/link?id=A106970137

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      다국어 초록 (Multilingual Abstract)

      Severe fever with thrombocytopenia syndrome (SFTS) is being reported annually in South Korea since its first detection there in 2010. The causal agent is a negative-strand RNA virus 80–100 nm in diameter. It causes fever, thrombocytopenia, leukocyto...

      Severe fever with thrombocytopenia syndrome (SFTS) is being reported annually in South Korea since its first detection there in 2010. The causal agent is a negative-strand RNA virus 80–100 nm in diameter. It causes fever, thrombocytopenia, leukocytopenia, gastrointestinal symptoms, and neural symptoms. The mortality rate of SFTS was 32.6% among 172 cases reported from 2012 to 2015 in South Korea. Thus, is necessary to develop an effective diagnostic method that selectively identifies the isolates circulating in South Korea. The real-time reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay is a simple, rapid, and sensitive approach for molecular diagnosis. Here, we designed novel primers for this assay and found that the technique had very high specificity, sensitivity, and efficiency. This real-time RTLAMP approach using the novel primers developed herein can be applied for early diagnosis of SFTSV strains in South Korea to reduce the mortality rate of SFTS.

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      참고문헌 (Reference)

      1 Ma, X. J., "Visual detection of pandemic influenza A H1N1 Virus 2009 by reverse-transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye" 167 : 214-217, 2010

      2 Jiao, L., "Structure of severe fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential" 87 : 6829-6839, 2013

      3 Lee, S. G., "Standardized positive controls for detection of norovirus by reverse transcription PCR" 8 : 260-, 2011

      4 Wu, H. C., "Spatial analysis and prediction of severe fever with thrombocytopenia syndrome in Zhejiang province, 2011-2015" 37 : 1485-1490, 2016

      5 백윤희, "Simple, Rapid and Sensitive Portable Molecular Diagnosis of SFTS Virus Using Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP)" 한국미생물·생명공학회 28 (28): 1928-1936, 2018

      6 Liu, Q., "Severe fever with thrombocytopenia syndrome, an emerging tick-borne zoonosis" 14 : 763-772, 2014

      7 Kim, Y. R., "Severe fever with thrombocytopenia syndrome virus infection, South Korea, 2010" 24 : 2103-2105, 2018

      8 Choi, S. J., "Severe fever with thrombocytopenia syndrome in South Korea, 2013-2015" 10 : e0005264-, 2016

      9 Li, D. X., "Severe fever with thrombocytopenia syndrome : a newly discovered emerging infectious disease" 21 : 614-620, 2015

      10 Yoshikawa, T., "Sensitive and specific PCR systems for detection of both Chinese and Japanese severe fever with thrombocytopenia syndrome virus strains and prediction of patient survival based on viral load" 52 : 3325-3333, 2014

      1 Ma, X. J., "Visual detection of pandemic influenza A H1N1 Virus 2009 by reverse-transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye" 167 : 214-217, 2010

      2 Jiao, L., "Structure of severe fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential" 87 : 6829-6839, 2013

      3 Lee, S. G., "Standardized positive controls for detection of norovirus by reverse transcription PCR" 8 : 260-, 2011

      4 Wu, H. C., "Spatial analysis and prediction of severe fever with thrombocytopenia syndrome in Zhejiang province, 2011-2015" 37 : 1485-1490, 2016

      5 백윤희, "Simple, Rapid and Sensitive Portable Molecular Diagnosis of SFTS Virus Using Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP)" 한국미생물·생명공학회 28 (28): 1928-1936, 2018

      6 Liu, Q., "Severe fever with thrombocytopenia syndrome, an emerging tick-borne zoonosis" 14 : 763-772, 2014

      7 Kim, Y. R., "Severe fever with thrombocytopenia syndrome virus infection, South Korea, 2010" 24 : 2103-2105, 2018

      8 Choi, S. J., "Severe fever with thrombocytopenia syndrome in South Korea, 2013-2015" 10 : e0005264-, 2016

      9 Li, D. X., "Severe fever with thrombocytopenia syndrome : a newly discovered emerging infectious disease" 21 : 614-620, 2015

      10 Yoshikawa, T., "Sensitive and specific PCR systems for detection of both Chinese and Japanese severe fever with thrombocytopenia syndrome virus strains and prediction of patient survival based on viral load" 52 : 3325-3333, 2014

      11 Xiong, W. Y., "Risk assessment of human infection with a novel bunyavirus in China" 3 : 69-74, 2012

      12 Parida, M., "Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of West Nile virus" 42 : 257-263, 2004

      13 Kurosaki, Y., "Rapid and simple detection of Ebola virus by reverse transcription-loop-mediated isothermal amplification" 141 : 7883-, 2007

      14 Jiao, Y., "Preparation and evaluation of recombinant severe fever with thrombocytopenia syndrome virus nucleocapsid protein for detection of total antibodies in human and animal sera by double-antigen sandwich enzyme-linked immunosorbent assay" 50 : 372-377, 2012

      15 Gai, Z., "Person-to-person transmission of severe fever with thrombocytopenia syndrome bunyavirus through blood contact" 54 : 249-252, 2012

      16 Yu-Jung Won, "Molecular genomic characterization of severe fever with thrombocytopenia syndrome virus isolates from South Korea" 한국미생물학회 57 (57): 927-937, 2019

      17 Notomi, T., "Loop-mediated isothermal amplification of DNA" 28 : E63-, 2000

      18 Zhang, Y., "Isolation, characterization, and phylogenic analysis of three new severe fever with thrombocytopenia syndrome bunyavirus strains derived from Hubei Province" 32 : 89-96, 2017

      19 Yu, X. J., "Fever with thrombocytopenia associated with a novel bunyavirus in China" 364 : 1523-1532, 2011

      20 Li, D. X., "Fever with thrombocytopenia associated with a novel bunyavirus in China" 25 : 81-84, 2011

      21 Lu, J., "Expression of structural and non-structural proteins of severe fever with thrombocytopenia syndrome bunyavirus" 27 : 515-520, 2011

      22 Poon, L. L. M., "Evaluation of real-time reverse transcriptase PCR and real-time loop-mediated amplification assays for severe acute respiratory syndrome coronavirus detection" 43 : 3457-3459, 2005

      23 Park, S. W., "Epidemiological and clinical features of severe fever with thrombocytopenia syndrome during an outbreak in South Korea, 2013–2015" 95 : 1358-1361, 2016

      24 Guo, C. T., "Epidemiological and clinical characteristics of severe fever with thrombocytopenia syndrome(SFTS)in China : an integrated data analysis" 144 : 1345-1354, 2016

      25 Sun, Y., "Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay" 53 : 48-53, 2012

      26 Wang, H., "Development of a real time reverse transcription loopmediated isothermal amplification method(RT-LAMP)for detection of a novel swine acute diarrhea syndrome coronavirus(SADS-CoV)" 260 : 45-48, 2018

      27 Zeng, F., "Development of a real time loop-mediated isothermal amplification method for detection of Senecavirus A" 261 : 98-103, 2018

      28 Parida, M., "Development and evaluation of reverse transcription loopmediated isothermal amplification assay for rapid and real-time detection of the swine-origin influenza A H1N1 virus" 13 : 100-107, 2011

      29 Jiang, T., "Development and evaluation of a reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71" 49 : 870-874, 2011

      30 Yang, G., "Development and evaluation of a reverse transcription loop-mediated isothermal amplification assay for rapid detection of a new SFTS bunyavirus" 157 : 1779-1783, 2012

      31 Oh, S. S., "Detection of severe fever with thrombocytopenia syndrome virus from wild animals and ixodidae ticks in the Republic of Korea" 16 : 408-414, 2016

      32 Cui, L., "Detection of severe fever with thrombocytopenia syndrome virus by reverse transcription-cross-priming amplification coupled with vertical flow visualization" 50 : 3881-3885, 2012

      33 Huang, X. Y., "Detection of new bunyavirus RNA by reverse transcription-loop-mediated isothermal amplification" 52 : 531-535, 2014

      34 Deng, M. H., "Detection of helminths by loop-mediated isothermal amplification assay : a review of updated technology and future outlook" 8 : 20-, 2019

      35 Fukuta, S., "Detection of Japanese yam mosaic virus by RT-LAMP" 148 : 1713-1720, 2003

      36 Devonshire, A. S., "Applicability of RNA standards for evaluating RT-qPCR assays and platforms" 12 : 118-, 2011

      37 Takayama-Ito, M., "Antiviral drugs against severe fever with thrombocytopenia syndrome virus infection" 11 : 150-, 2020

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      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2013-12-02 학술지명변경 외국어명 : The Journal of Microbiology -> Journal of Microbiology KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2004-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2001-07-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 1.76 0.2 1.22
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.91 0.73 0.399 0.07
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