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      SCIE SCOPUS KCI등재

      Swedish mutation within amyloid precursor protein modulates global gene expression towards the pathogenesis of Alzheimer`s disease = Swedish mutation within amyloid precursor protein modulates global gene expression towards the pathogenesis of Alzheimer`s disease

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      https://www.riss.kr/link?id=A82503511

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      다국어 초록 (Multilingual Abstract)

      The Swedish mutation (K595N/M596L) of amyloid precursor protein (APP-swe) has been known to increase abnormal cleavage of cellular APP by Beta-secretase (BACE), which causes tau protein hyperphosphorylation and early-onset Alzheimer`s disease (AD). He...

      The Swedish mutation (K595N/M596L) of amyloid precursor protein (APP-swe) has been known to increase abnormal cleavage of cellular APP by Beta-secretase (BACE), which causes tau protein hyperphosphorylation and early-onset Alzheimer`s disease (AD). Here, we analyzed the effect of APP-swe in global gene expression using deep transcriptome sequencing technique. We found 283 genes were down-regulated and 348 genes were up-regulated in APP-swe expressing H4-swe cells compared to H4 wild-type cells from a total of approximately 74 million reads of 38 base pairs from each transcriptome. Two independent mechanisms such as kinase and phosphatase signaling cascades leading hyperphosphorylation of tau protein were regulated by the expression of APP-swe. Expressions of catalytic subunit as well as several regulatory subunits of protein phosphatases 2A were decreased. In contrast, expressions of tau-phosphorylating glycogen synthase kinase 3β (GSK-3β), cyclin dependent kinase 5 (CDK5), and cAMP-dependent protein kinase A (PKA) catalytic subunit were increased. Moreover, the expression of AD-related Aquaporin 1 and presenilin 2 expression was regulated by APP-swe. Taken together, we propose that the expression of APP-swe modulates global gene expression directed to AD pathogenesis. [BMB reports 2010; 43(10): 704-709]

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      참고문헌 (Reference)

      1 Gautier, L., "affy--analysis of Affymetrix GeneChip data at the probe level" 20 : 307-315, 2004

      2 Nagalakshmi, U., "The transcriptional landscape of the yeast genome defined by RNA sequencing" 320 : 1344-3149, 2008

      3 von Rotz, R. C., "The APP intracellular domain forms nuclear multiprotein complexes and regulates the transcription of its own precursor" 117 : 4435-4448, 2004

      4 Cloonan, N., "Stem cell transcriptome profiling via massive-scale mRNA sequencing" 5 : 613-619, 2008

      5 Zhang, H., "Role of presenilins in neuronal calcium homeostasis" 30 : 8566-8580, 2010

      6 Wang, Z., "RNA-Seq: a revolutionary tool for transcriptomics" 10 : 57-63, 2009

      7 Passador-Gurgel, G., "Quantitative trait transcripts for nicotine resistance in Drosophila melanogaster" 39 : 264-268, 2007

      8 Pardossi-Piquard, R., "Presenilin-dependent transcriptional control of the Abeta-degrading enzyme neprilysin by intracellular domains of betaAPP and APLP" 46 : 541-554, 2005

      9 Qian, W., "PP2A regulates tau phosphorylation directly and also indirectly via activating GSK-3beta" 19 : 1221-1229, 2010

      10 Mortazavi, A., "Mapping and quantifying mammalian transcriptomes by RNA-Seq" 5 : 621-628, 2008

      1 Gautier, L., "affy--analysis of Affymetrix GeneChip data at the probe level" 20 : 307-315, 2004

      2 Nagalakshmi, U., "The transcriptional landscape of the yeast genome defined by RNA sequencing" 320 : 1344-3149, 2008

      3 von Rotz, R. C., "The APP intracellular domain forms nuclear multiprotein complexes and regulates the transcription of its own precursor" 117 : 4435-4448, 2004

      4 Cloonan, N., "Stem cell transcriptome profiling via massive-scale mRNA sequencing" 5 : 613-619, 2008

      5 Zhang, H., "Role of presenilins in neuronal calcium homeostasis" 30 : 8566-8580, 2010

      6 Wang, Z., "RNA-Seq: a revolutionary tool for transcriptomics" 10 : 57-63, 2009

      7 Passador-Gurgel, G., "Quantitative trait transcripts for nicotine resistance in Drosophila melanogaster" 39 : 264-268, 2007

      8 Pardossi-Piquard, R., "Presenilin-dependent transcriptional control of the Abeta-degrading enzyme neprilysin by intracellular domains of betaAPP and APLP" 46 : 541-554, 2005

      9 Qian, W., "PP2A regulates tau phosphorylation directly and also indirectly via activating GSK-3beta" 19 : 1221-1229, 2010

      10 Mortazavi, A., "Mapping and quantifying mammalian transcriptomes by RNA-Seq" 5 : 621-628, 2008

      11 Lipshutz, R. J., "High density synthetic oligonucleotide arrays" 21 : 20-24, 1999

      12 White, K. P., "Functional genomics and the study of development, variation and evolution" 2 : 528-537, 2001

      13 Brown, P. O., "Exploring the new world of the genome with DNA microarrays" 21 : 33-37, 1999

      14 Baek, S. H., "Exchange of N-CoR corepressor and Tip60 coactivator complexes links gene expression by NF-kappaB and beta-amyloid precursor protein" 110 : 55-67, 2002

      15 Rifkin, S. A., "Evolution of gene expression in the Drosophila melanogaster subgroup" 33 : 138-144, 2003

      16 Lindsey, J. C., "Epigenetic deregulation of multiple S100 gene family members by differential hypomethylation and hypermethylation events in medulloblastoma" 97 : 267-274, 2007

      17 Huysseune, S., "Epigenetic control of aquaporin 1 expression by the amyloid precursor protein" 23 : 4158-4167, 2009

      18 Wilhelm, B. T., "Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution" 453 : 1239-1243, 2008

      19 Cao, X., "Dissection of amyloidbeta precursor protein-dependent transcriptional transactivation" 279 : 24601-24611, 2004

      20 Filali, M., "Cognitive and non-cognitive behaviors in an APPswe/PS1 bigenic model of Alzheimer's disease" 8 : 143-148, 2009

      21 Kim, H. S., "C-terminal fragments of amyloid precursor protein exert neurotoxicity by inducing glycogen synthase kinase-3beta expression" 17 : 1951-1953, 2003

      22 Lambert, J. C., "Association at LRP gene locus with sporadic late-onset Alzheimer's disease" 351 : 1787-1788, 1998

      23 Kane, M. D., "Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays" 28 : 4552-4557, 2000

      24 Cao, X., "A transcriptionally [correction of transcriptively] active complex of APP with Fe65 and histone acetyltransferase Tip60" 293 : 115-120, 2001

      25 Sultan, M., "A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome" 321 : 956-960, 2008

      26 Scherf, U., "A gene expression database for the molecular pharmacology of cancer" 24 : 236-244, 2000

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      학술지등록 한글명 : BMB reports
      외국어명 : BMB reports
      2024 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2021-01-01 평가 등재학술지 선정 (해외등재 학술지 평가) KCI등재
      2020-12-01 평가 등재후보로 하락 (해외등재 학술지 평가) KCI등재후보
      2013-07-17 학술지명변경 한글명 : BMB reports -> BMB Reports
      외국어명 : BMB reports -> BMB Reports
      KCI등재
      2011-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2009-09-21 학회명변경 한글명 : 대한생화학ㆍ분자생물학회 -> 생화학분자생물학회
      영문명 : Korean Society Of Medical Biochemistry And Molecular Biology -> Korean Society Of Biochemistry And Molecular Biology
      KCI등재
      2009-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2007-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2005-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2002-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 2.76 0.5 1.94
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      1.45 1.12 0.646 0.12
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