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      KCI등재 SCOPUS SCIE

      Forensic and population genetic analyses of the GlobalFiler STR loci in the Mongolian population

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      https://www.riss.kr/link?id=A104429323

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      다국어 초록 (Multilingual Abstract)

      We have analyzed 24 loci including autosomal and Y-chromosomal short tandem repeats (STRs), Y-indel, and sex-determining marker in a sample of 267 unrelated individuals from the Mongolian population using the GlobalFiler™ PCR Amplification Kit to pr...

      We have analyzed 24 loci including autosomal and Y-chromosomal short tandem repeats (STRs), Y-indel, and sex-determining marker in a sample of 267 unrelated individuals from the Mongolian population using the GlobalFiler™ PCR Amplification Kit to provide an expanded and more reliable forensic database. Khalkh among 15 Mongolian minor-groups accounts for about 80% of the entire Mongolian population. A total of 267 different DNA profiles were found in this work. The highest gene diversity was observed in the SE33 (0.9376) locus, and the lowest value was found in the TPOX (0.6142) locus.
      Although individual power of discrimination estimates varied at the studied loci, combined probability of match from the 21 STR loci was estimated to be 1.139 × 10−24, which is highly informative. Based on the results of pairwise FST genetic distances and multi-dimensional scaling plot showed that Mongolians were clustered into Europeans and Asians, although Mongolia is geographically located in Northeastern Asia. Thus, the present survey of the Mongolian population may help establish a comprehensive reference database for forensic and population genetic analyses.

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      참고문헌 (Reference)

      1 Kwak KD, "Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia" 119 : 195-201, 2005

      2 Krenke BE, "Validation of a 16-locus fluorescent multiplex system" 47 : 773-785, 2002

      3 Hill CR, "U.S. population data for 29 autosomal STR loci" 7 : e82-e83, 2013

      4 Tereba A, "Tools for analysis of population statistics" 2 : 14-16, 1999

      5 Hammer MF, "The role of the Y chromosome in human evolutionary studies" 5 : 57-75, 1996

      6 Pfeiffer H, "The results of an mtDNA study of 1200 inhabitants of a German village in comparison to other Caucasian databases and its relevance for forensic casework" 114 : 169-172, 2001

      7 Weir BS, "The rarity of DNA profiles" 1 : 358-370, 2007

      8 Jin HJ, "The peopling of Korea revealed by analyses of mitochondrial DNA and Y-chromosomal markers" 4 : e4210-, 2009

      9 Sprecher C, "The PowerPlex™ 16 System" 4 : 3-6, 2000

      10 Rerkamnuaychoke B, "Thai population data on 15 tetrameric STR loci-D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818and FGA" 158 : 234-237, 2006

      1 Kwak KD, "Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia" 119 : 195-201, 2005

      2 Krenke BE, "Validation of a 16-locus fluorescent multiplex system" 47 : 773-785, 2002

      3 Hill CR, "U.S. population data for 29 autosomal STR loci" 7 : e82-e83, 2013

      4 Tereba A, "Tools for analysis of population statistics" 2 : 14-16, 1999

      5 Hammer MF, "The role of the Y chromosome in human evolutionary studies" 5 : 57-75, 1996

      6 Pfeiffer H, "The results of an mtDNA study of 1200 inhabitants of a German village in comparison to other Caucasian databases and its relevance for forensic casework" 114 : 169-172, 2001

      7 Weir BS, "The rarity of DNA profiles" 1 : 358-370, 2007

      8 Jin HJ, "The peopling of Korea revealed by analyses of mitochondrial DNA and Y-chromosomal markers" 4 : e4210-, 2009

      9 Sprecher C, "The PowerPlex™ 16 System" 4 : 3-6, 2000

      10 Rerkamnuaychoke B, "Thai population data on 15 tetrameric STR loci-D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818and FGA" 158 : 234-237, 2006

      11 Varga T, "Short tandem repeat data analysis in a Mongolian popula" 5 (5): S156-S159, 2003

      12 Dobashi Y, "STR data for the AmpFLSTR Identifiler loci in Bangladeshi and Indonesian populations" 7 : 222-226, 2005

      13 Bacher JW, "Progress in forensic genetics 8" Elsevier 33-36, 2000

      14 Liu K, "PowerMarker: an integrated analysis environment for genetic marker analysis" 21 : 2128-2129, 2005

      15 Piatek J, "Population genetics of 15 autosomal STR loci in the population of Pomorze Zachodnie (NW Poland)" 2 : e41-e43, 2008

      16 Yuan L, "Population genetics analysis of 38 STR loci in the She population from Fujian Province of China" 16 : 314-318, 2014

      17 Park HC, "Population genetic study for 24 STR loci and Y indel (GlobalFiler™ PCR Amplification kit and PowerPlex ® Fusion system) in 1000 Korean individuals" 21 : 53-57, 2016

      18 Maruyama S, "Population data on 15 STR loci using AmpF/STR Indentifiler kit in a Malay population living in and around Kuala Lumpur, Malaysia" 10 : 160-162, 2008

      19 Almeida C, "Population data of the GlobalFiler ® Express loci in South Portuguese population" 19 : 39-41, 2015

      20 Ramos-González B, "Population data of 24 STRs in Mexican-Mestizo population from Monterrey, Nuevo Leon (Northeast, Mexico)based on PowerPlex ® Fusion and GlobalFiler ® kits" 21 : e15-e17, 2016

      21 Sadam M, "Population data for 22 autosomal STR loci from Estonia" 129 : 1219-1220, 2015

      22 Smith BG, "Population data for 15 STR loci (Identifiler kit) in a Filipino population" 11 : 159-161, 2009

      23 Felsenstein J, "PHYLIP version 3.695" University of Washington 2013

      24 Allen M, "Mitochondrial DNA sequencing of shed hairs and saliva on robbery caps: sensitivity and matching probabilities" 43 : 453-464, 1998

      25 Imaizumi K, "Identification of fragmented bones based on anthropological and DNA analyses:case report" 4 : 251-256, 2002

      26 Omran GA, "Genetic variation of 15autosomal STR loci in Upper (Southern) Egyptians" 3 : e39-e44, 2009

      27 Tillmar AO, "Genetic variation of 15 autosomal STR loci in a Somali population" 4 : e19-e20, 2009

      28 Edwards A, "Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups" 12 : 241-253, 1992

      29 Babiker HM, "Genetic variation and population structure of Sudanese populations as indicated by 15 Identifiler sequence-tagged repeat (STR)loci" 2 : 12-, 2011

      30 Tie J, "Genetic polymorphisms of 15 STR loci in a Japanese population" 51 : 188-189, 2006

      31 Novković T, "Genetic polymorphisms of 15 AmpFlSTR Identifiler loci in a Serbian population" 4 : e149-e150, 2010

      32 Zha L, "Genetic polymorphism of 21 non-CODIS STR loci in the Chinese Mongolian ethnic minority" 9 : e32-e33, 2014

      33 Chaudhari RR, "Genetic diversity of 15 autosomal short tandem repeats loci using the AmpFlSTR ® Indentifiler ™ kit in a Bhil Tribe Population from Gujarat state, India" 20 : 148-152, 2014

      34 Schneider PM, "Expansion of the European standard set of DNA database loci—the current situation" 12 : 6-7, 2009

      35 Kayser M, "Evaluation of Y-chromosomal STRs: a multicenter study" 110 : 125-133, 1997

      36 Lins AM, "Development and population study of an eight-locus short tandem repeat (STR) multiplex system" 43 : 1168-1180, 1998

      37 Hill CR, "Concordance and population studies along with stutter and peak height ratio analysis for the PowerPlex ® ESX 17and ESI 17 systems" 5 : 269-275, 2011

      38 de Knijff P, "Chromosome Y microsatellites: population genetic and evolutionary aspects" 110 : 134-149, 1997

      39 Excoffier L, "Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows" 10 : 564-567, 2010

      40 Kraaijenbrink T, "Allele frequency distribution for 21 autosomal STR loci in Bhutan" 170 : 68-72, 2007

      41 Ota M, "Allele frequencies for 15 STR loci in Tibetan populations from Nepal" 169 : 234-238, 2007

      42 Forster P, "A short tandem repeat-based phylogeny for the human Y chromosome" 67 : 182-196, 2000

      43 Toscanini U, "A reference frequency database of 15 autosomal STRs in Chile" 19 : 35-36, 2015

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      2016 0.51 0.12 0.38
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
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