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      Structural characterization of HBx-interacting protein using NMR spectroscopy

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      https://www.riss.kr/link?id=A103450301

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      다국어 초록 (Multilingual Abstract)

      The hepatitis B virus X protein (HBx) is highly linked with liver diseases and the development of hepatocellular carcinoma. HBx-interacting protein (XIP) has been shown to abolish the transactivation functions of HBx. Here, we define the structural ch...

      The hepatitis B virus X protein (HBx) is highly linked with liver diseases and the development of hepatocellular carcinoma. HBx-interacting protein (XIP) has been shown to abolish the transactivation functions of HBx. Here, we define the structural characteristics and HBx binding properties of XIP. Under physiological conditions, XIP was composed mainly of random-coils but significant helicity was induced in the hydrophobic condition. NMR spectroscopy defined the secondary structure of XIP in the presence of sodium dodecyl sulfate. Four putative helices were mapped to the amino acids 8-12, 32-38, 42-54 and 82-91. Any deletion of defined putative helices in XIP led to loss of binding to HBx, and truncated mutant lacking last putative helix decreased helicity more than that it could. Our results suggest that XIP requires its entire sequence for HBx binding and it may be under drastic conformational change when binds to HBx.

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      다국어 초록 (Multilingual Abstract)

      The hepatitis B virus X protein (HBx) is highly linked with liver diseases and the development of hepatocellular carcinoma. HBxinteracting protein (XIP) has been shown to abolish the transactivation functions of HBx. Here, we define the structural cha...

      The hepatitis B virus X protein (HBx) is highly linked with liver diseases and the development of hepatocellular carcinoma. HBxinteracting protein (XIP) has been shown to abolish the transactivation functions of HBx. Here, we define the structural characteristics and HBx binding properties of XIP. Under physiological conditions, XIP was composed mainly of random-coils but significant helicity was induced in the hydrophobic condition. NMR spectroscopy defined the secondary structure of XIP in the presence of sodium dodecyl sulfate. Four putative helices were mapped to the amino acids 8-12, 32-38, 42-54 and 82-91. Any deletion of defined putative helices in XIP led to loss of binding to HBx, and truncated mutant lacking last putative helix decreased helicity more than that it could. Our results suggest that XIP requires its entire sequence for HBx binding and it may be under drastic conformational change when binds to HBx. Key words: HBx, XIP, NMR, natively unfolded protein

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      참고문헌 (Reference)

      1 "cosolvents come of age Recent studies with peptides and proteins Quarterly Reviews of Biophysics" 31 (31): 1998

      2 "a subunit shared by eukaryotic nuclear RNA polymerases binds human hepatitis B virus X protein and may play a role in X transactivation" 14 (14): 1995

      3 "a High-Sensitivity 3d Nmr Experiment to Correlate Amide-Proton and Nitrogen Resonances with the Alpha-Carbon and Beta-Carbon Resonances in Proteins Journal of Magnetic Resonance Series B" 1993

      4 "The role of hepatitis B virus in the development of hepatocellular carcinoma Seminars in Virology" 7 (7): 1996

      5 "The enigmatic X gene of hepatitis B virus" 78 : 12725-, 2004

      6 "The Origin and Removal of Artifacts in 3d Hcaco Spectra of Proteins Uniformly Enriched with C-13 Journal of Magnetic Resonance Series B" 1993

      7 "Rapid Recording of 2d Nmr-Spectra without Phase Cycling - Application to the Study of Hydrogen-Exchange in Proteins Journal of Magnetic Resonance" 1989

      8 "Quantitative analysis of protein far UV circular dichroism spectra by neural networks" 1992

      9 "Proteasome complex as a potential cellular target of hepatitis B virus X protein" 70 : 5582-, 1996

      10 "Nmrpipe - a Multidimensional Spectral Processing System Based on Unix Pipes Journal of Biomolecular Nmr" 6 : 277-, 1995

      1 "cosolvents come of age Recent studies with peptides and proteins Quarterly Reviews of Biophysics" 31 (31): 1998

      2 "a subunit shared by eukaryotic nuclear RNA polymerases binds human hepatitis B virus X protein and may play a role in X transactivation" 14 (14): 1995

      3 "a High-Sensitivity 3d Nmr Experiment to Correlate Amide-Proton and Nitrogen Resonances with the Alpha-Carbon and Beta-Carbon Resonances in Proteins Journal of Magnetic Resonance Series B" 1993

      4 "The role of hepatitis B virus in the development of hepatocellular carcinoma Seminars in Virology" 7 (7): 1996

      5 "The enigmatic X gene of hepatitis B virus" 78 : 12725-, 2004

      6 "The Origin and Removal of Artifacts in 3d Hcaco Spectra of Proteins Uniformly Enriched with C-13 Journal of Magnetic Resonance Series B" 1993

      7 "Rapid Recording of 2d Nmr-Spectra without Phase Cycling - Application to the Study of Hydrogen-Exchange in Proteins Journal of Magnetic Resonance" 1989

      8 "Quantitative analysis of protein far UV circular dichroism spectra by neural networks" 1992

      9 "Proteasome complex as a potential cellular target of hepatitis B virus X protein" 70 : 5582-, 1996

      10 "Nmrpipe - a Multidimensional Spectral Processing System Based on Unix Pipes Journal of Biomolecular Nmr" 6 : 277-, 1995

      11 "Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators Structural characterization of HBx-interacting 137" 415 (415): 2002

      12 "Improved 3d Triple-Resonance Nmr Techniques Applied to a 31-Kda Protein Journal of Magnetic Resonance" 1992

      13 "High-level production of uniformly 15N- and 13C-enriched fusion proteins in Escherichia coli" 7 : 131-, 1996

      14 "Hepatitis B virus transactivator protein X interacts with the TATA-binding protein Structural characterization of HBx-interacting 135" 92 (92): 1995

      15 "Hepatitis B virus pX targets TFIIB in transcription coactivation" 18 : 1562-, 1998

      16 "Hepatitis B virus X protein interferes with cellular DNA repair" 72 : 266-, 1998

      17 "Hepatitis B virus X protein interacts with a probable cellular DNA repair protein" 69 : 1107-, 1995

      18 "Hepatitis B virus X protein and p53 tumor suppressor interactions in the modulation of apoptosis" 94 : 14707-, 1997

      19 "Hepatitis B virus HBx protein induces transcription factor AP-1 by activation of extracellular signal-regulated and c-Jun N-terminal mitogen-activated protein kinases" 70 : 4978-, 1996

      20 "HBx protein of hepatitis B virus activates Jak1-STAT signaling" 273 : 25510-, 1998

      21 "Expression of deletion mutants of the hepatitis B virus protein HBx in E-coli and characterization of their RNA binding activities" 74 (74): 2001

      22 R. Truant,, "Direct interaction of the hepatitis B virus HBx protein with p53 leads to inhibition by HBx of p53 response element-directed transactivation" 69 : 1851-, 1995

      23 "Direct Interaction of the Hepatitis-B Virus Hbx Protein with P53 Leads to Inhibition by Hbx of P53 Response Element-Directed Transactivation Journal of Virology" 69 (69): 1995

      24 "Correlation of Backbone Amide and Aliphatic Side-Chain Resonances in C-13/N-15-Enriched Proteins by Isotropic Mixing of C-13 Magnetization Journal of Magnetic Resonance Series B" 1993

      25 "Correlating Backbone Amide and Side-Chain Resonances in Larger Proteins by Multiple Relayed Triple Resonance Nmr Journal of the American 136 Young-Tae Lee et al/ J" 1992

      26 "Cloning and characterization of a novel hepatitis B virus x binding protein that inhibits viral replication" 72 : 1737-, 1998

      27 "Chemical-Shifts as a Tool for Structure Determination"

      28 "Calculation of Protein Conformation from Circular-Dichroism Methods in Enzymology" 1986

      29 ""Intrinsically unstructured proteins and their functions"" 6 (6): 2005

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2022 평가예정 재인증평가 신청대상 (재인증)
      2019-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2016-01-01 평가 등재학술지 선정 (계속평가) KCI등재
      2015-12-01 평가 등재후보로 하락 (기타) KCI등재후보
      2011-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2010-03-12 학술지명변경 한글명 : Journal of the Korean Magnetic Resonance -> Journal of the Korean Magnetic Resonance Society
      외국어명 : Journal of the Korean Magnetic Resonance -> Journal of the Korean Magnetic Resonance Society
      KCI등재
      2008-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2007-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2005-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.41 0.41 0.36
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.3 0.26 0.301 0.17
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