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      KCI등재 SCIE SCOPUS

      Molecular Characterization of a Novel 1,3-α-3,6-Anhydro-L-Galactosidase, Ahg943, with Cold- and High-Salt-Tolerance from Gayadomonas joobiniege G7

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      https://www.riss.kr/link?id=A107142556

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      다국어 초록 (Multilingual Abstract)

      1,3-α-3,6-anhydro-L-galactosidase (α-neoagarooligosaccharide hydrolase) catalyzes the last step of agar degradation by hydrolyzing neoagarobiose into monomers, D-galactose, and 3,6-anhydro-Lgalactose, which is important for the bioindustrial applica...

      1,3-α-3,6-anhydro-L-galactosidase (α-neoagarooligosaccharide hydrolase) catalyzes the last step of agar degradation by hydrolyzing neoagarobiose into monomers, D-galactose, and 3,6-anhydro-Lgalactose, which is important for the bioindustrial application of algal biomass. Ahg943, from the agarolytic marine bacterium Gayadomonas joobiniege G7, is composed of 423 amino acids (47.96 kDa), including a 22-amino acid signal peptide. It was found to have 67% identity with the α-neoagarooligosaccharide hydrolase ZgAhgA, from Zobellia galactanivorans, but low identity (< 40%) with the other α-neoagarooligosaccharide hydrolases reported. The recombinant Ahg943 (rAhg943, 47.89 kDa), purified from Escherichia coli, was estimated to be a monomer upon gel filtration chromatography, making it quite distinct from other α-neoagarooligosaccharide hydrolases. The rAhg943 hydrolyzed neoagarobiose, neoagarotetraose, and neoagarohexaose into D-galactose, neoagarotriose, and neoagaropentaose, respectively, with a common product, 3,6- anhydro-L-galactose, indicating that it is an exo-acting α-neoagarooligosaccharide hydrolase that releases 3,6-anhydro-L-galactose by hydrolyzing α-1,3 glycosidic bonds from the nonreducing ends of neoagarooligosaccharides. The optimum pH and temperature of Ahg943 activity were 6.0 and 20°C, respectively. In particular, rAhg943 could maintain enzyme activity at 10°C (71% of the maximum). Complete inhibition of rAhg943 activity by 0.5 mM EDTA was restored and even, remarkably, enhanced by Ca2+ ions. rAhg943 activity was at maximum at 0.5 M NaCl and maintained above 73% of the maximum at 3M NaCl. Km and Vmax of rAhg943 toward neoagarobiose were 9.7 mg/ml and 250 μM/min (3 U/mg), respectively. Therefore, Ahg943 is a unique α-neoagarooligosaccharide hydrolase that has cold- and high-salt-adapted features, and possibly exists as a monomer.

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      참고문헌 (Reference)

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      10 Klausen MS, "NetSurfP-2. 0 : improved prediction of protein structural features by integrated deep learning" 87 : 520-527, 2019

      1 Miller GL, "Use of dinitrosalicylic acid reagent for determination of reducing sugar" 31 : 426-428, 1959

      2 Hehemann JH, "Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota" 464 : 908-912, 2010

      3 Pons T, "Three acidic residues are at the active site of a beta-propeller architecture in glycoside hydrolase families 32, 43, 62, and 68" 54 : 424-432, 2004

      4 Saitou N, "The neighbor-joining method : A new method for reconstructing phylogenetic trees" 4 : 406-425, 1987

      5 Lineweaver H, "The determination of enzyme dissociation constants" 56 : 658-666, 1934

      6 Kim HT, "The complete enzymatic saccharification of agarose and its application to simultaneous saccharification and fermentation of agarose for ethanol production" 107 : 301-306, 2012

      7 Liu J, "Preparation and properties of wet-spun agar fibers" 181 : 760-767, 2018

      8 Ranalli G, "Onsite advanced biocleaning system for historical wall paintings using new agar-gauze bacteria gel" 126 : 1785-1796, 2019

      9 Lam PL, "Non-toxic agarose/gelatin-based microencapsulation system containing gallic acid for antifungal application" 35 : 503-510, 2015

      10 Klausen MS, "NetSurfP-2. 0 : improved prediction of protein structural features by integrated deep learning" 87 : 520-527, 2019

      11 Asghar S, "Molecular cloning and characterization of a novel cold-adapted alkaline 1, 3-α-3, 6-anhydro-l-galactosidase, Ahg558, from Gayadomonas joobiniege G7" 188 : 1077-1095, 2019

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      13 Elkahlout K, "Long-term biological hydrogen production by agar immobilized Rhodobacter capsulatus in a sequential batch photobioreactor" 40 : 589-599, 2017

      14 지원재, "Isolation and Characterization of a Novel Agar-Degrading Marine Bacterium, Gayadomonas joobiniege gen, nov, sp. nov., from the Southern Sea, Korea" 한국미생물·생명공학회 23 (23): 1509-1518, 2013

      15 Park SH, "Implications of agar and agarase in industrial applications of sustainable marine biomass" 104 : 2815-2832, 2020

      16 Guerrero C, "Immobilization of Aspergillus oryzae b-galactosidase in an agarose matrix functionalized by four different methods and application to the synthesis of lactulose" 232 : 53-63, 2017

      17 Asghar S, "Identification and biochemical characterization of a novel coldadapted 1, 3-a-3, 6-anhydro-L-galactosidase, Ahg786, from Gayadomonas joobiniege G7" 102 : 8855-8866, 2018

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      28 Choi U, "Characterization of a novel neoagarobiose-producing GH42 β-agarase, AgaJ10, from Gayadomonas joobiniege G7" 189 : 1-12, 2019

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      32 Jung S, "Biochemical characterization of a novel cold-adapted GH39 β-agarase, AgaJ9, from an agar-degrading marine bacterium Gayadomonas joobiniege G7" 101 : 1965-1974, 2017

      33 Ficko-Blean E, "Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans : novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family" 71 : 209-223, 2015

      34 이영림, "Biochemical Characterization of a Novel GH86 β-Agarase Producing Neoagarohexaose from Gayadomonas joobiniege G7" 한국미생물·생명공학회 28 (28): 284-292, 2018

      35 Han, "Biochemical Characterization of a New β-Agarase from Cellulophaga Algicola" MDPI AG 20 (20): 2143-, 2019

      36 Pandit P, "Bio-based Materials for Food Packaging" Springer 2018

      37 Hehemann JH, "Analysis of keystone enzyme in Agar hydrolysis provides insight into the degradation(of a polysaccharide from)red seaweeds" 287 : 13985-13995, 2012

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-04-04 학술지명변경 한글명 : -> Journal of Microbiology and Biotechnology KCI등재
      2006-03-30 학술지등록 한글명 :
      외국어명 : Journal of Microbiology and Biotechnology
      KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2004-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2001-07-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 1.59 0.33 1.17
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.91 0.78 0.472 0.08
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