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      CRISPR-Cas9 system을 이용한 Kluyveromyces marxianus 17694-DH2 균주의 자일로스 소비속도 증진 = Application of Genome Editing Method on Kluyveromyces marxianus 17694-DH2 using CRISPR-Cas9 System for Enhanced Xylose Utilization

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      https://www.riss.kr/link?id=A106508197

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      다국어 초록 (Multilingual Abstract)

      The third-generation gene editing technology, CRISPR-Cas9 system, is derived from the bacterial immune system. These CRISPR-Cas9 systems have recently been used to mutate yeast gene or replace cleavage sites with other DNA. In this study, CRISPR-Cas9 ...

      The third-generation gene editing technology, CRISPR-Cas9 system, is derived from the bacterial immune system. These CRISPR-Cas9 systems have recently been used to mutate yeast gene or replace cleavage sites with other DNA. In this study, CRISPR-Cas9 system was applied to delete PHO13 gene of Kluyveromyces marxianus. As a result, only one strain of three transformants, that the CRISPR-Cas9 system was applied, was confirmed partial deletion of PHO13 gene. Sequencing of the PHO13 gene revealed the deletion of cytosine at position 457, which resulted in premature termination of translation as compared to that from the parental strain.
      The ΔPHO13 strain, K. marxianus 17694-DH2, showed 18.29% and 21.28% improvement in xylose consumption and ethanol production from xylose, respectively, as compared to those form the parental strain.

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      참고문헌 (Reference)

      1 Doudna, J. A., "The new frontier of genome engineering with CRISPR-Cas9" 346 : 2014

      2 Hughes, D., "The effect of temperature on the kinetics of ethanol production by a thermotolerant strain of Kluveromyces marxianus" 6 : 1-6, 1984

      3 Anders, C., "Structural basis of PAM-dependent target DNA recognition by the Cas9endonuclease" 513 : 569-573, 2014

      4 Brouns, S. J., "Small CRISPR RNAs guide antiviral defense in prokaryotes" 321 : 960-964, 2008

      5 Kim, S. R., "Rational and evolutionary engineering approaches uncover a small set of genetic changes efficient for rapid xylose fermentation in Saccharomyces cerevisiae" 8 : r57048-, 2013

      6 Tsai, C. S., "Rapid and marker‐free refactoring of xylose‐fermenting yeast strains with Cas9/CRISPR" 112 : 2406-2411, 2015

      7 Park J.-B, "Overexpression of Endogenous Xylose Reductase Enhanced Xylitol Productivity at 40°C by Thermotolerant Yeast Kluyveromyces marxianus" 1-12, 2019

      8 Hoshida, H., "Non‐homologous end joining‐mediated functional marker selection for DNA cloning in the yeast Kluyveromyces marxianus" 31 : 29-46, 2014

      9 Suzuki, T., "High-temperature ethanol production by a series of recombinant xylose-fermenting Kluyveromyces marxianus strains" 109359-, 2019

      10 Anderson, P., "High-efficiency carbohydrate fermentation to ethanol at temperatures above 40 C by Kluyveromyces marxianus var. marxianus isolated from sugar mills" 51 : 1314-1320, 1986

      1 Doudna, J. A., "The new frontier of genome engineering with CRISPR-Cas9" 346 : 2014

      2 Hughes, D., "The effect of temperature on the kinetics of ethanol production by a thermotolerant strain of Kluveromyces marxianus" 6 : 1-6, 1984

      3 Anders, C., "Structural basis of PAM-dependent target DNA recognition by the Cas9endonuclease" 513 : 569-573, 2014

      4 Brouns, S. J., "Small CRISPR RNAs guide antiviral defense in prokaryotes" 321 : 960-964, 2008

      5 Kim, S. R., "Rational and evolutionary engineering approaches uncover a small set of genetic changes efficient for rapid xylose fermentation in Saccharomyces cerevisiae" 8 : r57048-, 2013

      6 Tsai, C. S., "Rapid and marker‐free refactoring of xylose‐fermenting yeast strains with Cas9/CRISPR" 112 : 2406-2411, 2015

      7 Park J.-B, "Overexpression of Endogenous Xylose Reductase Enhanced Xylitol Productivity at 40°C by Thermotolerant Yeast Kluyveromyces marxianus" 1-12, 2019

      8 Hoshida, H., "Non‐homologous end joining‐mediated functional marker selection for DNA cloning in the yeast Kluyveromyces marxianus" 31 : 29-46, 2014

      9 Suzuki, T., "High-temperature ethanol production by a series of recombinant xylose-fermenting Kluyveromyces marxianus strains" 109359-, 2019

      10 Anderson, P., "High-efficiency carbohydrate fermentation to ethanol at temperatures above 40 C by Kluyveromyces marxianus var. marxianus isolated from sugar mills" 51 : 1314-1320, 1986

      11 Schiestl, R. H., "High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier" 16 : 339-346, 1989

      12 Enkler, L., "Genome engineering in the yeast pathogen Candida glabrata using the CRISPR-Cas9 system" 6 : 35766-, 2016

      13 Kwon, D. -H., "Ethanol production from xylose is highly increased by the Kluyveromyces marxianus mutant 17694-DH1" 42 : 63-70, 2019

      14 Goshima, T., "Ethanol fermentation from xylose by metabolically engineered strains of Kluyveromyces marxianus" 116 : 551-554, 2013

      15 Kim, J. -S., "Enhanced xylitol production by mutant Kluyveromyces marxianus 36907-FMEL1 due to improved xylose reductase activity" 176 : 1975-1984, 2015

      16 Szczelkun, M. D., "Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes" 111 : 9798-9803, 2014

      17 Nambu-Nishida, Y., "Development of a comprehensive set of tools for genome engineering in a cold-and thermo-tolerant Kluyveromyces marxianus yeast strain" 7 : 8993-, 2017

      18 Kim, S. R., "Deletion of PHO13, encoding haloacid dehalogenase type IIA phosphatase, results in upregulation of the pentose phosphate pathway in Saccharomyces cerevisiae" 81 : 1601-1609, 2015

      19 Sternberg, S. H., "DNA interrogation by the CRISPR RNA-guided endonuclease Cas9" 507 : 62-67, 2014

      20 Löbs, A. -K., "CRISPR–Cas9-enabled genetic disruptions for understanding ethanol and ethyl acetate biosynthesis in Kluyveromyces marxianus" 10 : 164-, 2017

      21 Ribeiro, O., "Application of the Cre-loxP system for multiple gene disruption in the yeast Kluyveromyces marxianus" 131 : 20-26, 2007

      22 Kim, S. -B., "Alleviation of catabolite repression in Kluyveromyces marxianus: the thermotolerant SBK1 mutant simultaneously coferments glucose and xylose" 12 : 90-, 2019

      23 Bommer, G. T., "Accumulation of metabolic side products might favor the production of ethanol in Pho13 knockout strains" 3 : 495-, 2016

      24 Guy, C. P., "A novel nuclease-ATPase (Nar71) from archaea is part of a proposed thermophilic DNA repair system" 32 : 6176-6186, 2004

      25 Makarova, K. S., "A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis" 30 : 482-496, 2002

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2022 평가예정 재인증평가 신청대상 (재인증)
      2019-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2016-01-01 평가 등재학술지 선정 (계속평가) KCI등재
      2015-12-01 평가 등재후보로 하락 (기타) KCI등재후보
      2011-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2009-08-28 학술지명변경 한글명 : 한국생물공학회지 -> KSBB Journal
      외국어명 : Korean Journal of Biotechnology and Bioengineering -> Korean Society for Biotechnology and Bioengineering Journal
      KCI등재
      2009-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2007-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2005-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2002-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.37 0.37 0.38
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.37 0.36 0.662 0.02
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