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      KCI등재 SCIE SCOPUS

      The completemitochondrial genome of the endangered Apollo butterfly, Parnassius apollo (Lepidoptera: Papilionidae) and its comparison to other Papilionidae species

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      https://www.riss.kr/link?id=A104735884

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      다국어 초록 (Multilingual Abstract)

      The Apollo butterfly, Parnassius apollo is a representative species of the butterfly subfamily Parnassiinae. Thischarming species is one of the most endangered butterfly species in the world. In this study, we sequenced itscomplete mitochondrial genom...

      The Apollo butterfly, Parnassius apollo is a representative species of the butterfly subfamily Parnassiinae. Thischarming species is one of the most endangered butterfly species in the world. In this study, we sequenced itscomplete mitochondrial genome (mitogenome), with the aim of accumulating genetic information for furtherstudies of population genetics and mitogenome evolution in the Papilionidae. The 15,404-bp long mitogenomeharbors a typical set of 37 genes and is the largest butterfly mitogenome determined, except for Papiliomaraho (16,094 bp). Like many other sequenced lepidopteran species, one tRNATrp-like and onetRNALeu(UUR)-like sequences were detected in the AT-rich region. A total of 164 bp of non-codingsequences are dispersed in 14 regions throughout the genome. The longest intergenic spacer (68 bp) islocated between tRNASer(AGN) and tRNAGlu, and is the largest spacer at this location among Papilionidaespecies. This spacer may have resulted from an 8-fold repetition of a TTTCTTCT motif or a 4-fold repetitionof a CTTTATTT motif.

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      참고문헌 (Reference)

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      5 Taylor, M. F., "The lepidopteran mitochondrial control region: structure and evolution" 10 : 1259-1272, 1993

      6 Zhao, F., "The first mitochondrial genome for the butterfly family Riodinidae and its systematic implications" 34 : 109-119, 2013

      7 Ji, L. W., "The completemitochondrial genome of the dragon swallowtail, Sericinus montela Gray (Lepidoptera:Papilionidae) and its phylogenetic implication" 55 : 91-100, 2012

      8 Crease, T., "The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea)" 233 : 89-99, 1999

      9 Cha, S. Y., "The complete nucleotide sequence and gene organization of themitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae)" 392 : 206-220, 2007

      10 Cao, Y. Q., "The complete mitochondrial genomes of two ghost moths, Thitarodes renzhiensis and Thitarodes yunnanensis: the ancestral gene arrangement in Lepidoptera" 13 : 276-, 2012

      1 Lowe, T. M., "tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence" 25 : 955-964, 1997

      2 Simmons, R. B., "Utility and evolution of cytochrome b in insects" 20 : 196-210, 2001

      3 Collins, N. M., "Threatened Swallowtail Butterflies of the World" IUCN 1985

      4 Taanman, J. W., "The mitochondrial genome: structure, transcription, translation and replication" 1410 : 103-123, 1999

      5 Taylor, M. F., "The lepidopteran mitochondrial control region: structure and evolution" 10 : 1259-1272, 1993

      6 Zhao, F., "The first mitochondrial genome for the butterfly family Riodinidae and its systematic implications" 34 : 109-119, 2013

      7 Ji, L. W., "The completemitochondrial genome of the dragon swallowtail, Sericinus montela Gray (Lepidoptera:Papilionidae) and its phylogenetic implication" 55 : 91-100, 2012

      8 Crease, T., "The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea)" 233 : 89-99, 1999

      9 Cha, S. Y., "The complete nucleotide sequence and gene organization of themitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae)" 392 : 206-220, 2007

      10 Cao, Y. Q., "The complete mitochondrial genomes of two ghost moths, Thitarodes renzhiensis and Thitarodes yunnanensis: the ancestral gene arrangement in Lepidoptera" 13 : 276-, 2012

      11 Hu, J., "The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae:Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event" 37 : 3431-3438, 2010

      12 Cameron, S. L., "The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths" 408 : 112-123, 2008

      13 Wu, L. W., "The complete mitochondrial genome of the near–threatened swallowtail, Agehana maraho (Lepidoptera: Papilionidae): evaluating sequence variability and suitable markers for conservation genetic studies" 121 : 267-280, 2010

      14 Wang, X. C., "The complete mitochondrial genome of the laced fritillary Argyreus hyperbius (Lepidoptera:Nymphalidae)" 32 : 465-475, 2011

      15 Salvato, P., "The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae)" 9 : 331-, 2008

      16 Dong, Y., "The complete mitochondrial genome of the Alpine black swallowtail, Papilio maackii (Insecta: Lepidoptera: Papilionidae)" 24 : 639-641, 2013

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      21 Perna, N. T., "Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genome" 41 : 353-358, 1995

      22 Gimenez, D.M, "Parnassius apollo. IUCN 2013. IUCN Red List of Threatened Species. Version 2013.1"

      23 Caterino, M. S., "Papilio phylogeny based on mitochondrial cytochrome oxidase I and II genes" 11 : 122-137, 1999

      24 Cameron, S. L., "Mitochondrial genomic comparisons of the subterranean termites fromthe Genus Reticulitermes (Insecta: Isoptera: Rhinotermitidae)" 50 : 188-202, 2007

      25 Tamura, K., "MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, andmaximum parsimony methods" 28 : 2731-2739, 2011

      26 Cameron, S. L., "Insect mitochondrial genomics: implications for evolution and phylogeny" 59 : 95-117, 2014

      27 Simon, C., "Incorporating molecular evolution into phylogenetic analysis and a new compilation of conserved polymerase chain reaction primers for animal mitochondrial DNA" 37 : 545-579, 2006

      28 Nardi, F., "Hexapod origins:monophyletic or paraphyletic?" 299 : 1887-1889, 2003

      29 Boore, J. L., "Gene translocation links insects and crustaceans" 392 : 667-668, 1998

      30 Cantatore, P., "Duplication and remodeling of tRNA genes during the evolutionary rearrangement of mitochondrial genomes" 329 : 853-855, 1987

      31 Sun, Q. Q., "Complete sequence of themitochondrial genome of the Japanese buff-tip moth, Phalera flavescens (Lepidoptera: Notodontidae)" 11 : 4213-4225, 2012

      32 Hao, J. S., "Complete mitogenomes of Euploea mulciber (Nymphalidae: Danainae) and Libythea celtis (Nymphalidae: Libytheinae) and their phylogenetic implications" 491636 : 1-14, 2013

      33 Hong, M. Y., "Complete mitogenome sequence of the jewel beetle, Chrysochroa fulgidissima (Coleoptera:Buprestidae)" 20 : 46-60, 2009

      34 Qin, F., "Complete mitochondrial genome of the Teinopalpus aureus guangxiensis (Lepidoptera: Papilionidae) and related phylogenetic analyses" 23 : 123-125, 2013

      35 김만일, "Complete Nucleotide Sequence and Organization of the Mitogenome of the Red-Spotted Apollo Butterfly, Parnassius bremeri (Lepidoptera: Papilionidae) and Comparison with Other Lepidopteran Insects" 한국분자세포생물학회 28 (28): 347-363, 2009

      36 Gillespie, J. J., "Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) Rrna genes of Apis mellifera (Insecta: Hymenoptera): structure, organization and retrotransposable elements" 15 : 657-686, 2006

      37 Still, J., "Butterflies and Moths of Britain and Europe" Harper Collins 1996

      38 Carter, D., "Butterflies and Moths" Dorling Kindersley 2000

      39 Hall, T. A., "BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT" 41 : 95-98, 1999

      40 Nelson, L. A., "Beyond barcoding: a mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae)" 511 : 131-142, 2012

      41 Boore, J. L., "Animal mitochondrial genomes" 27 : 1767-1780, 1999

      42 Wolstenholme, D. R., "Animal mitochondrial DNA: structure and evolution" 141 : 173-216, 1992

      43 Cameron, S. L., "A mitochondrial genome phylogeny of Diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision" 32 : 40-59, 2007

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      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2003-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2002-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2001-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 1.08 0.26 0.85
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.72 0.62 0.212 0.08
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