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      KCI등재 SCIE SCOPUS

      The First Identified Citrus tristeza virus Isolate of Turkey Contains a Mixture of Mild and Severe Strains

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      https://www.riss.kr/link?id=A104492481

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      다국어 초록 (Multilingual Abstract)

      The presence of Citrus tristeza virus (CTV) has previously been reported in citrus growing regions of Turkey. All serologically and biologically characterized isolates including I d r, which was the first identified CTV isolates from Turkey, were cons...

      The presence of Citrus tristeza virus (CTV) has previously been reported in citrus growing regions of Turkey. All serologically and biologically characterized isolates including I d r, which was the first identified CTV isolates from Turkey, were considered mild isolates. In this study, molecular characteristics of the I d r isolate were determined by different methods. Analysis of the I d r isolate by western blot and BD-RT-PCR assays showed the presence of MCA13 epitope, predominantly found in severe isolates, in the I d r isolate revealing that it contains a severe component. For further characterization,the coat protein (CP) and the RNA-dependent RNA polymerase (RdRp) genes representing the 3'and 5' half of CTV genome, respectively, were amplified from dsRNA by RT-PCR. Both genes were cloned separately and two clones for each gene were sequenced.
      Comparisons of nucleotide and deduced amino acid sequences showed that while two CP gene sequences were identical, two RdRp clones showed only 90% and 91% sequence identity in their nucleotide and amino acid sequences, respectively, suggesting a mixed infection with different strains. Phylogenetic analyses of the CP and RdRp genes of I d r isolate with previously characterized CTV isolates from different citrus growing regions showed that the CP gene was clustered with NZRBTH30,a resistance breaking isolate from New Zealand,clearly showing the presence of severe component.
      Furthermore, two different clones of the RdRp gene were clustered separately with different CTV isolates with a diverse biological activity. While the RdRp-1 was clustered with T30 and T385, two well-characterized mild isolates from Florida and Spain, respectively, the RdRp-2 was most closely related to NZRB-G90 and NZRB-TH30, two well-characterized resistance breaking and stem pitting (SP) isolates from New Zealand confirming the mixed infection. These results clearly demonstrated that the I d r isolate, which was previously described as biologically a mild isolate, actually contains a mixture of mild and severe strains.

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      참고문헌 (Reference)

      1 Ylmaz, M. i A., "Virus and Virus-like diseases of citrus in Turkey In: Options Méditerranéennes" CIHEAMIAMB 85-93, 1999

      2 Ayllón, M. A., "Variations in two gene sequences of Citrus tristeza virus after host passage" 32 : 119-128, 2006

      3 Mawassi, M., "Unusual sequence relationships between two isolates of Citrus tristeza virus" 177 : 2359-2364, 1996

      4 Roistacher, C. N., "Transmission of tristeza seedling yellow tristeza virus by Aphis gossypii from sweet orange, grapefruit, and lemon to Mexican lime, grape fruit, and lemon" IOCV 9-18, 1984

      5 Garnsey, S. M., "Toward a standard evaluation of the biologically properties of Citrus tristeza virus" 19 : 151-157, 1987

      6 Febres, V. J., "The p27 protein is present at one end of Citrus tristeza virus particles" 86 : 1331-1335, 1996

      7 Bar-Joseph, M., "The continuous challenge of Citrus tristeza virus control" 27 : 291-316, 1989

      8 Vives, M. C., "The complete genome sequence of the major component of a mild Citrus tristeza virus isolate" 80 : 811-816, 1999

      9 Bar-Joseph, M., "The Closteroviruses: a distinct group of elongated plant viruses" 25 : 93-168, 1979

      10 Muller, G. W., "Susceptibility of citrus varities, species, citrus relatives, and non-rutecous plants to slash-cut machanical inoculation with Citrus tristeza virus" IOCV 62-65, 1984

      1 Ylmaz, M. i A., "Virus and Virus-like diseases of citrus in Turkey In: Options Méditerranéennes" CIHEAMIAMB 85-93, 1999

      2 Ayllón, M. A., "Variations in two gene sequences of Citrus tristeza virus after host passage" 32 : 119-128, 2006

      3 Mawassi, M., "Unusual sequence relationships between two isolates of Citrus tristeza virus" 177 : 2359-2364, 1996

      4 Roistacher, C. N., "Transmission of tristeza seedling yellow tristeza virus by Aphis gossypii from sweet orange, grapefruit, and lemon to Mexican lime, grape fruit, and lemon" IOCV 9-18, 1984

      5 Garnsey, S. M., "Toward a standard evaluation of the biologically properties of Citrus tristeza virus" 19 : 151-157, 1987

      6 Febres, V. J., "The p27 protein is present at one end of Citrus tristeza virus particles" 86 : 1331-1335, 1996

      7 Bar-Joseph, M., "The continuous challenge of Citrus tristeza virus control" 27 : 291-316, 1989

      8 Vives, M. C., "The complete genome sequence of the major component of a mild Citrus tristeza virus isolate" 80 : 811-816, 1999

      9 Bar-Joseph, M., "The Closteroviruses: a distinct group of elongated plant viruses" 25 : 93-168, 1979

      10 Muller, G. W., "Susceptibility of citrus varities, species, citrus relatives, and non-rutecous plants to slash-cut machanical inoculation with Citrus tristeza virus" IOCV 62-65, 1984

      11 Albiach-Marti, M. R., "Sequences of Citrus tristeza virus separated in time and space are essentially identical" 74 : 6856-6865, 2000

      12 Herrera-Isidrón, L., "Sequence diversity on four ORFs of Citrus tristeza virus correlates with pathogenicity" 6 : 116-, 2009

      13 Niblett, C. L., "Progress on strain differentiation of Citrus tristeza virus and its application to the epidemiology of citrus tristeza disease" 71 : 97-106, 2000

      14 Mawassi, M., "Nucleotide sequence of the coat protein gene of Citrus tristeza virus, Comparison of biologically diverse isolates collected in Israel" 73 : 265-275, 1993

      15 Suastika, G., "Nucleotide sequence of Citrus tristeza virus seedling yellow isolate" 67 : 73-77, 2001

      16 Pappu, H. R., "Nucleotide sequence and organization of eight 3' open reading frames of the citrus tristeza closterovirus genome" 199 : 35-46, 1994

      17 Sekiya, M. E., "Molecular cloning and nucleotide sequencing of the coat protein gene of Citrus tristeza virus" 72 : 1013-1020, 1991

      18 Yang, Z. N., "Molecular characterization of an isolate of Citrus tristeza virus that causes severe symptoms in sweet orange" 19 : 131-142, 1999

      19 Pappu, H. R., "Molecular characterization of a structural epitope that is largely conserved among severe isolates of a plant virus" 90 : 641-3644, 1993

      20 Morris, T. J., "Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue" 69 : 854-858, 1979

      21 Harper, S. J., "Isolates of Citrus tristeza virus that overcome Poncirus trifoliata resistance comprise a novel strain" 155 : 471-480, 2010

      22 Korkmaz, S., "Investigation of biological properties, doublestranded RNA patterns and antigen concentration in citrus species infected with Citrus tristeza virus" 30 : 420-428, 2002

      23 Balo lu, S., "Identification, Purification, Serology (with ELISA and SDS-Immunodiffusion tests), and properties of Citrus tristeza virus (CTV) in East Mediterranean Region of Turkey" Çukurova University 1988

      24 Baloglu, S., "Historical review of Citrus tristeza virus (CTV) and its vectors in Turkey, In Options Méditerranéennes, Series B.65 Citrus tristeza virus and Toxoptera citricidus: a serious threat to the Mediterranean citrus industry ed. by A. D’Onghia" CIHEAM-IAMB 85-88, 2009

      25 Roy, A., "Grouping and comparison of Indian Citrus tristeza virus isolates based on coat protein gene sequences and restriction analysis patterns" 148 : 707-722, 2003

      26 Korkmaz, S., "First report of the presence of Citrus tristeza virus in the eastern Black Sea region of Turkey" 88 (88): 69-, 2006

      27 Ilharco, F. A., "First report of Toxoptera citricidus (Kirkaldy) in continental Portugal and Spain (Homoptera, Aphidoidea)" 51 : 19-21, 2005

      28 Sentandreu, V., "Evolutionary analysis of genetic variation observed in Citrus tristeza virus (CTV) after host passage" 151 : 875-894, 2006

      29 Yokomi, R. K., "Establishment of the brown citrus aphid (Homoptera:Aphididae) in Central America and the Caribbean Basin and transmission of Citrus tristeza virus" 87 : 1078-1085, 1994

      30 Halbert, S. E., "Distribution and characterization of Citrus tristeza virus in South Florida following establishment of Toxoptera citricida" 88 : 935-941, 2004

      31 Nolasco, G., "Development of an asymmetric PCR-ELISA typing method for Citrus tristeza virus based on the coat protein gene" 155 : 97-108, 2009

      32 Ylmaz, M. A., "Detection of CTV by Immunoprinting in the Eastern Mediterranean Region of Turkey. In: Options Méditerranéennes, Series B.21" CIHEAM-IAMB 129-133, 1998

      33 Karasev, A., "Complete sequence of the Citrus tristeza virus RNA genome" 208 : 511-520, 1995

      34 Harper, S. J., "Complete genome sequences of two distinct and diverse Citrus tristeza virus isolates from New Zealand" 154 : 1505-1510, 2009

      35 Moreno, P., "Citrus tristeza virus: a pathogen that changed the course of the citrus industry" 9 : 251-268, 2008

      36 Rocha-Pena, M. A., "Citrus tristeza virus and its aphid vector Toxoptera citricida Threats to citrus production in the Caribbean and Central and North America" 79 : 437-445, 1995

      37 Bar-Joseph, M., "Citrus tristeza virus Description of Plant Viruses" Commonwealth Mycological Institute/Association of Applied Biologist Key Surrey 7-, 1990

      38 Korkmaz, S., "Biological, serological, and molecular characterization of Citrus tristeza virus isolates from different citrus cultivation regions of Turkey" 32 : 369-379, 2008

      39 Cevik, B., "Application of bi-directional PCR to Citrus tristeza virus: Detection and strain differentiation" IOCV 17-24, 1996

      40 Roistacher, C. N., "Aphid transmission of Citrus tristeza virus: a rewiew" 19 : 163-167, 1987

      41 Permar, T. A., "A monoclonal antibody that discriminate strains of Citrus tristeza virus" 80 : 224-228, 1990

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