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      Transcriptome analysis of differential gene expression in Dichomitus squalens during interspecific mycelial interactions and the potential link with laccase induction

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      https://www.riss.kr/link?id=A106027052

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      다국어 초록 (Multilingual Abstract)

      Interspecific mycelial interactions between white rot fungi are always accompanied by an increased production of laccase. In this study, the potential of the white rot fungus Dichomitus squalens to enhance laccase production during interactions with t...

      Interspecific mycelial interactions between white rot fungi are always accompanied by an increased production of laccase. In this study, the potential of the white rot fungus Dichomitus squalens to enhance laccase production during interactions with two other white rot fungi, Trametes versicolor or Pleurotus ostreatus, was assessed. To probe the mechanism of laccase induction and the role that laccase plays during combative interaction, we analyzed the differential gene expression profile of the laccase induction response to stressful conditions during fungal interaction. We further confirmed the expression patterns of 16 selected genes by qRT-PCR analysis. We noted that many differentially expressed genes (DEGs) encoded proteins that were involved in xenobiotic detoxification and reactive oxygen species (ROS) generation or reduction, including aldo/keto reductase, glutathione S-transferases, cytochrome P450 enzymes, alcohol oxidases and dehydrogenase, manganese peroxidase and laccase. Furthermore, many DEG-encoded proteins were involved in antagonistic mechanisms of nutrient acquisition and antifungal properties, including glycoside hydrolase, glucanase, chitinase and terpenoid synthases. DEG analyses effectively revealed that laccase induction was likely caused by protective responses to oxidative stress and nutrient competition during interspecific fungal interactions.

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      참고문헌 (Reference)

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      2 Dong, Y. C., "The synergistic effect on production of lignin-modifying enzymes through submerged co-cultivation of Phlebia radiata, Dichomitus squalens and Ceriporiopsis subvermispora using agricultural residues" 35 : 751-760, 2012

      3 Cho, N. S., "The role of laccase from white rot fungi to stress conditions" 54 : 81-83, 2009

      4 Flundas, D., "The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes" 336 : 1715-, 2012

      5 Floudas, D., "The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes" 336 : 1715-, 2012

      6 Ujor, V. C., "The mycelial response of the white-rot fungus, Schizophyllum commune to the biocontrol agent, Trichoderma viride" 116 : 332-341, 2012

      7 Eggert, C., "The ligninolytic system of the white rot fungus Pycnoporus cinnabarinus : purification and characterization of the laccase" 62 : 1151-, 1996

      8 Nosanchuk, J. D., "The contribution of melanin to microbial pathogenesis" 5 : 203-223, 2003

      9 Chen, C. H., "Targeting aldehyde dehydrogenase 2 : new therapeutic opportunities" 94 : 1-34, 2014

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      21 Kannaiyan, R., "Nutrient media optimization for simultaneous enhancement of the laccase and peroxidases production by coculture of Dichomitus squalens and Ceriporiopsis subvermispora" 62 : 173-185, 2015

      22 Eyre, C., "Microarray analysis of differential gene expression elicited in Trametes versicolor during interspecific mycelial interactions" 114 : 646-660, 2010

      23 Jonkers, W., "Metabolome and transcriptome of the interaction between Ustilago maydis and Fusarium verticillioides in vitro" 78 : 3656-3667, 2012

      24 Peiris, D., "Metabolite profiles of interacting mycelial fronts differ for pairings of the wood decay basidiomycete fungus, Stereum hirsutum with its competitors Coprinus micaceus and Coprinus disseminatus" 4 : 52-62, 2008

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      36 Yang, Y., "Expression of the laccase gene from a white rot fungus in Pichia pastoris can enhance the resistance of this yeast to H2O2-mediated oxidative stress by stimulating the glutathionebased antioxidative system" 78 : 5845-5854, 2012

      37 Kuhar, F., "Enhancement of laccase production and malachite green decolorization by co-culturing Ganoderma lucidum and Trametes versicolor in solid-state fermentation" 104 : 238-243, 2015

      38 Jaszek, M., "Enhanced extracellular laccase activity as a part of the response system of white rot fungi : Trametes versicolor and Abortiporus biennis to paraquat-caused oxidative stress conditions" 85 : 147-154, 2006

      39 Arfi, Y., "Differential gene expression in Pycnoporus coccineus during interspecific mycelial interactions with different competitors" 79 : 6626-6636, 2013

      40 Iakovlev, A., "Differential gene expression during interactions between Heterobasidion annosum and Physisporinus sanguinolentus" 241 : 79-85, 2004

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      43 Eisenman, H. C., "Cryptococcus neoformans laccase catalyses melanin synthesis from both D-and L-DOPA" 153 : 3954-3962, 2007

      44 Daniel, G., "Characteristics of Gloeophyllum trabeum alcohol oxidase, an extracellular source of H2O2 in brown rot decay of wood" 73 : 6241-6253, 2007

      45 Evans, J. A., "Changes in volatile production during interspecific interactions between four wood rotting fungi growing in artificial media" 1 : 57-68, 2008

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      47 Hiscox, J., "Changes in oxidative enzyme activity during interspecific mycelial interactions involving the white-rot fungus Trametes versicolor" 47 : 562-571, 2010

      48 Chi, Y., "Can co-culturing of two white-rot fungi increase lignin degradation and the production of lignin-degrading enzymes? Int" 59 : 32-39, 2007

      49 Mazhawidza, W., "Bioinformatic identification of aldo-keto reductase from newly isolated arthrobacter nicotianae strain PR and its phylogenetic analysis among soil bacteria" 2 : 1-7, 2014

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      51 Cruz-Ortega, R., "Allelochemical stress can trigger oxidative damage in receptor plants" 2 : 269-270, 2007

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