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      KCI등재 SCOPUS SCIE

      Trim46 contributes to the midbrain development via Sonic Hedgehog signaling pathway in zebrafish embryos

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      https://www.riss.kr/link?id=A107292689

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      다국어 초록 (Multilingual Abstract)

      TRIM46 is a RING finger E3 ligase which belongs to TRIM (tripartite motif-containing) protein family. TRIM46 is required for neuronal polarity and axon specification by driving the formation of parallel microtubule arrays, whereas its embryological fu...

      TRIM46 is a RING finger E3 ligase which belongs to TRIM (tripartite motif-containing) protein family.
      TRIM46 is required for neuronal polarity and axon specification by driving the formation of parallel microtubule arrays, whereas its embryological functions remain to be determined yet. Expression patterns and biological functions of trim46a, a zebrafish homologue of TRIM46, were studied in zebrafish embryo. First, maternal transcripts of trim46a were present at 1 cell stage whereas zygotic messages were abundant in the eyes, MHB (Midbrain-Hindbrain Boundary) and hindbrain at 24 hpf (hours post fertilization). Second, transcriptional regulatory region of trim46a contains cis-acting elements binding a transcriptional factor Foxa2. Transcription of foxa2 is positively regulated by Sonic Hedgehog (SHH), and treatment of cyclopamine, an SHH inhibitor, represses transcription of foxa2 in 4 hpf through 24 hpf embryos. Third, the transcriptional repression of foxa2 inhibited transcription of trim46a to cause developmental defects in the midbrain and MHB. Finally, spatiotemporal expression patterns of a midbrain marker otx2b in the developmental defects confirmed inhibition of SHH by cyclopamine caused underdevelopment of the midbrain and MHB at 24 hpf. We propose a signaling network where trim46a contributes to development of the midbrain and MHB via Foxa2, a downstream element of SHH signaling in zebrafish embryogenesis.

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      참고문헌 (Reference)

      1 정장함, "Znf76 is associated with development of the eyes, midbrain, MHB, and hindbrain in zebrafish embryos" 한국통합생물학회 23 (23): 26-31, 2019

      2 McNab FW, "Tripartitemotif proteins and innate immune regulation" 23 : 46-56, 2011

      3 Jiang W, "Tripartite motif-containing 46 promotes viability and inhibits apoptosis of osteosarcoma cells by activating NF-B signaling through ubiquitination of PPAR" 28 : 409-421, 2020

      4 최서연, "Trim45 is essential to the development of the diencephalon and eye in zebrafish embryos" 한국통합생물학회 24 (24): 99-106, 2020

      5 Westerfield M, "The zebrafish book : A guide for the laboratory use of zebrafish(Danio rerio)" Univ. of Oregon Press 2000

      6 Reymond A, "The tripartite motif family identifies cell compartments" 20 : 2140-2151, 2001

      7 Incardona JP, "The teratogenic veratrum alkaloid cyclopamine inhibits sonic hedgehog signal transduction" 125 : 3553-3562, 1998

      8 Ichinose S, "The spatiotemporal construction of the axon initial segment via KIF3/KAP3/TRIM46 transport under MARK2 signaling" 28 : 2413-2426, 2019

      9 Kittappa R, "The foxa2 gene controls the birth and spontaneous degeneration of dopamine neurons in old age" 5 : e325-, 2007

      10 Hannenhalli S, "The evolution of Fox genes and their role in development and disease" 10 : 233-240, 2009

      1 정장함, "Znf76 is associated with development of the eyes, midbrain, MHB, and hindbrain in zebrafish embryos" 한국통합생물학회 23 (23): 26-31, 2019

      2 McNab FW, "Tripartitemotif proteins and innate immune regulation" 23 : 46-56, 2011

      3 Jiang W, "Tripartite motif-containing 46 promotes viability and inhibits apoptosis of osteosarcoma cells by activating NF-B signaling through ubiquitination of PPAR" 28 : 409-421, 2020

      4 최서연, "Trim45 is essential to the development of the diencephalon and eye in zebrafish embryos" 한국통합생물학회 24 (24): 99-106, 2020

      5 Westerfield M, "The zebrafish book : A guide for the laboratory use of zebrafish(Danio rerio)" Univ. of Oregon Press 2000

      6 Reymond A, "The tripartite motif family identifies cell compartments" 20 : 2140-2151, 2001

      7 Incardona JP, "The teratogenic veratrum alkaloid cyclopamine inhibits sonic hedgehog signal transduction" 125 : 3553-3562, 1998

      8 Ichinose S, "The spatiotemporal construction of the axon initial segment via KIF3/KAP3/TRIM46 transport under MARK2 signaling" 28 : 2413-2426, 2019

      9 Kittappa R, "The foxa2 gene controls the birth and spontaneous degeneration of dopamine neurons in old age" 5 : e325-, 2007

      10 Hannenhalli S, "The evolution of Fox genes and their role in development and disease" 10 : 233-240, 2009

      11 Versteeg GA, "The E3-ligase TRIM family of proteins regulates signaling pathways triggered by innate immune pattern-recognition receptors" 38 : 384-398, 2013

      12 Harterink M, "TRIM46 organizes microtubule fasciculation in the axon initial segment" 39 : 4864-4873, 2019

      13 van Beuningen SFB, "TRIM46 controls neuronal polarity and axon specification by driving the formation of parallel microtubule arrays" 88 : 1208-1226, 2015

      14 Meroni G, "TRIM/RBCC, a novel class of ‘single protein RING finger’ E3 ubiquitin ligases" 27 : 1147-1157, 2005

      15 Ozato K, "TRIM family proteins and their emerging roles in innate immunity" 8 : 849-860, 2008

      16 Wingender E, "TRANSFAC : a database on transcription factors and their DNA binding sites" 24 : 238-241, 1996

      17 Short KM, "Subclassification of the RBCC/TRIM superfamily reveals a novel motif necessary for microtubule binding" 281 : 8970-8980, 2006

      18 Thisse C, "Structure of the zebrafish snail1 gene and its expression in wild-type, spadetail and no tail mutant embryos" 119 : 1203-1215, 1993

      19 Kay JN, "Staggered cell-intrinsic timing of ath5 expression underlies the wave of ganglion cell neurogenesis in the zebrafish retina" 132 : 2573-2585, 2005

      20 Kimmel CB, "Stages of embryonic development of the zebrafish" 203 : 253-310, 1995

      21 강나미, "Siah Ubiquitin Ligases Modulate Nodal Signaling during Zebrafish Embryonic Development" 한국분자세포생물학회 37 (37): 389-398, 2014

      22 Chiang MC, "Rosiglitazone activation of PPARγ-dependent pathways is neuroprotective in human neural stem cells against amyloid-beta-induced mitochondrial dysfunction and oxidative stress" 40 : 181-190, 2016

      23 Ajeet Kumar, "Rnf152 Is Essential for NeuroD Expression and Delta-Notch Signaling in the Zebrafish Embryos" 한국분자세포생물학회 40 (40): 945-953, 2017

      24 Deshaies RJ, "RING domain E3 ubiquitin ligases" 78 : 399-434, 2009

      25 Hsieh YC, "Pparα deficiency inhibits the proliferation of neuronal and glial precursors in the zebrafish central nervous system" 247 : 1264-1275, 2018

      26 Soufi A, "Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming" 161 : 555-568, 2015

      27 Kleiger G, "Perilous journey : a tour of the ubiquitin-proteasome system" 24 : 352-359, 2014

      28 Curcio M, "Microtubule organization in the axon : TRIM46 determines the orientation" 88 : 1072-1074, 2015

      29 Nakatani T, "Lmx1a and Lmx1b cooperate with Foxa2 to coordinate the specification of dopaminergic neurons and control of floor plate cell differentiation in the developing mesencephalon" 339 : 101-113, 2010

      30 Chen JK, "Inhibition of Hedgehog signaling by direct binding of cyclopamine to smoothened" 16 : 2743-2748, 2002

      31 Kiecker C, "Hedgehog signaling from the ZLI regulates diencephalic regional identity" 7 : 1242-1249, 2004

      32 Metzger MB, "HECT and RING finger families of E3 ubiquitin ligases at a glance" 125 : 531-537, 2012

      33 Chen X, "Genome-wide binding studies reveal DNA binding specificity mechanisms and functional interplay amongst Forkhead transcription factors" 44 : 1566-1578, 2016

      34 Balaskas N, "Gene regulatory logic for reading the Sonic Hedgehog signaling gradient in the vertebrate neural tube" 148 : 273-284, 2012

      35 Lam EW, "Forkhead box proteins : tuning forks for transcriptional harmony" 13 : 482-495, 2013

      36 Fréal A, "Feedback-driven assembly of the axon initial segment" 104 : 305-321, 2019

      37 Li Y, "Expression of two zebrafish orthodenticle-related genes in the embryonic brain" 48 (48): 229-244, 1994

      38 Nalepa G, "Drug discovery in the ubiquitin-proteasome system" 5 : 596-613, 2006

      39 Koh KP, "Domain requirements and sequence specificity of DNA binding for the forkhead transcription factor FOXP3" 4 : e8109-, 2009

      40 Schäfer M, "Discontinuous organization and specification of the lateral floor plate in zebrafish" 301 : 117-129, 2007

      41 Clark KL, "Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5" 364 : 412-420, 1993

      42 Li Y, "Clostridium difficile toxin B induces colonic inflammation through the TRIM46/DUSP1/MAPKs and NF-κB signalling pathway" 48 : 452-462, 2020

      43 Bayly RD, "A novel role for FOXA2and SHH in organizing midbrain signaling centers" 369 : 32-42, 2012

      44 Krauss S, "A functionally conserved homolog of the drosophila segment polarity gene HH is expressed in tissues with polarizing activity in zebrafish embryos" 75 : 1431-1444, 1993

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2010-02-02 학회명변경 한글명 : 한국동물학회 -> 한국통합생물학회
      영문명 : 미등록 -> The Korean Society for Integrative Biology
      KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-02-26 학술지명변경 한글명 : Integrative Biosciences -> Animal Cells and Systems
      외국어명 : Integrative Biosciences -> Animal Cells and Systems
      KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2005-04-15 학술지등록 한글명 : Integrative Biosciences
      외국어명 : Integrative Biosciences
      KCI등재
      2004-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2001-07-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.45 0.24 0.33
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.28 0.26 0.395 0.04
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