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      Tracing the footprints of the ABCDE model of flowering in Phalaenopsis equestris (Schauer) Rchb.f. (Orchidaceae)

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      https://www.riss.kr/link?id=A106502741

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      다국어 초록 (Multilingual Abstract)

      Orchids are indispensable to the floriculture industry due to their unique floral organization. The flowers have two outer whorls of tepals including a lip (labellum), and two inner whorls, pollinia and gynostemiun (column). The floral organization an...

      Orchids are indispensable to the floriculture industry due to their unique floral organization. The flowers have two outer whorls of tepals including a lip (labellum), and two inner whorls, pollinia and gynostemiun (column). The floral organization and development is controlled at the molecular level, mainly by the MADS-box gene family, comprising homeotic genes divided into type I and type II groups. The type I group has four sub-groups, Mα, Mβ, Mγ, and Mδ, playing roles in seed, embryo, and female repro-ductive organ development; the type II group genes form classes A, B, C, D, and E, which are a part of the MIKCC subgroup with specific roles in florigenesis and organization. The coordinated functioning of these classes regulates the development of various floral whorls. The availability of genome and transcriptome sequence data for Phalaenopsis equestris offers an opportunity to validate the ABCDE model of flower development. Hence, this study sought to characterize the MADS-box gene family and elucidate of the ABCDE model. A total of 48 identified MADS-box proteins, including 20 type I [Mα (12), Mγ (8)] and 28 type II [MIKCC (27), MIKC* (1)] members, were characterized for physico-chemical features and domains and motifs organization. The exon-intron distribution and the upstream cis-regulatory elements in the promoter regions of MADS-box genes were also analysed. The discrete pace of duplication events in type I and type II genes suggested differential evolutionary constraints between groups. The correlation of spatio-temporal expression pattern with the presence of specific cis-regulatory elements and putative protein–protein interaction within the different classes of MADS-box gene family endorse the ABCDE model of floral development.

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      참고문헌 (Reference)

      1 Mondragón-Palomino M, "Why are orchid flowers so diverse? Reduction of evolutionary constraints by paralogues of class B floral homeotic genes" 104 : 583-594, 2009

      2 Zhao Y, "Whole-genome survey and characterization of MADS-box gene family in maize and sorghum" 105 : 159-173, 2011

      3 Nam J, "Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms" 101 : 1910-1915, 2004

      4 Henschel K, "Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens" 19 : 801-814, 2002

      5 Lin CS, "Transcriptome-wide analysis of the MADS-box gene family in the orchid Erycina pusilla" 284-298, 2016

      6 Yanofsky MF, "The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors" 346 : 35-39, 1990

      7 Cai J, "The genome sequence of the orchid Phalaenopsis equestris" 47 : 65-72, 2014

      8 Masiero S, "The emerging importance of type I MADS box transcription factors for plant reproduction" 23 : 865-872, 2011

      9 Masiero S, "The emerging importance of type I MADS box transcription factors for plant reproduction" 23 : 865-872, 2011

      10 Shore P, "The MADS-box family of transcription factors" 229 : 1-13, 1995

      1 Mondragón-Palomino M, "Why are orchid flowers so diverse? Reduction of evolutionary constraints by paralogues of class B floral homeotic genes" 104 : 583-594, 2009

      2 Zhao Y, "Whole-genome survey and characterization of MADS-box gene family in maize and sorghum" 105 : 159-173, 2011

      3 Nam J, "Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms" 101 : 1910-1915, 2004

      4 Henschel K, "Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens" 19 : 801-814, 2002

      5 Lin CS, "Transcriptome-wide analysis of the MADS-box gene family in the orchid Erycina pusilla" 284-298, 2016

      6 Yanofsky MF, "The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors" 346 : 35-39, 1990

      7 Cai J, "The genome sequence of the orchid Phalaenopsis equestris" 47 : 65-72, 2014

      8 Masiero S, "The emerging importance of type I MADS box transcription factors for plant reproduction" 23 : 865-872, 2011

      9 Masiero S, "The emerging importance of type I MADS box transcription factors for plant reproduction" 23 : 865-872, 2011

      10 Shore P, "The MADS-box family of transcription factors" 229 : 1-13, 1995

      11 Pnueli L, "The MADS box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes from Antirrhinum and Arabidopsis" 1 : 255-266, 1991

      12 Aceto S, "The MADS and the Beauty: Genes Involved in the Development of Orchid Flowers" 12 : 342-356, 2011

      13 Bemer M, "The MADS Domain Protein DIANA Acts Together with AGAMOUS-LIKE80 to Specify the Central Cell in Arabidopsis Ovules" 20 : 2088-2101, 2008

      14 Yan L, "The Genome of Dendrobium officinale Illuminates the Biology of the Important Traditional Chinese Orchid Herb" 8 : 922-934, 2015

      15 Zhang GQ, "The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution" 6 : 19029-, 2016

      16 Zhang GQ, "The Apostasia genome and the evolution of orchids" 549 : 2017

      17 Kang IH, "The AGL62 MADS domain protein regulates cellularization during endosperm development in Arabidopsis" 20 : 635-647, 2008

      18 Alok Sharma, "Thaumatin-like protein kinases: Molecular characterization and transcriptional profiling in five cereal crops" Elsevier BV 290 : 110317-, 2020

      19 Egea-Cortines M, "Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus" 18 : 5370-5379, 1999

      20 Song IJ, "Spatiotemporal expression of duplicate AGAMOUS orthologues during floral development in Phalaenopsis" 216 : 301-313, 2006

      21 Passmore S, "Saccharomyces cerevisiae protein involved in plasmid maintenance is necessary for mating of MATα cells" 204 : 593-606, 1988

      22 Immink RG, "SEPALLATA3: the ‘glue’ for MADS box transcription factor complex formation" 10 : R24-, 2009

      23 Malcomber ST, "SEPALLATA gene diversification: brave new whorls" 10 : 427-435, 2005

      24 Zhang H, "Regulation of Arabidopsis root development by nitrate availability" 51 : 51-59, 2000

      25 Bouyer D, "Polycomb Repressive Complex 2 Controls the Embryo-to-Seedling Phase Transition. (GP Copenhaver, Ed.)" 7 : e1002014-, 2011

      26 Theissen G, "Plant biology. Floral quartets" 409 : 469-471, 2001

      27 Tsai WC, "PeMADS6, a GLOBOSA/PISTILLATA-like gene in Phalaenopsis equestris involved in petaloid formation, and correlated with flower longevity and ovary development" 46 : 1125-1139, 2005

      28 Gan Y, "Nutritional regulation of ANR1 and other root-expressed MADS-box genes in Arabidopsis thaliana" 222 : 730-742, 2005

      29 Lu ZX, "Nucleotide sequence of a flower-specific MADS box cDNA clone from orchid" 23 : 901-904, 1993

      30 Drews GN, "Negative regulation of the Arabidopsis homeotic gene AGAMOUS by the APETALA2 product" 65 : 991-1002, 1991

      31 Davies B, "Multiple interactions amongst floral homeotic MADS box proteins" 15 : 4330-4343, 1996

      32 Kramer EM, "Molecular evolution of genes controlling petal and stamen development: duplication and divergence within the APETALA3 and PISTILLATA MADS-box gene lineages" 149 : 765-783, 1998

      33 Angenent GC, "Molecular control of ovule development" 1 : 228-232, 1996

      34 Parenicová L, "Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world" 15 : 1538-1551, 2003

      35 Hsu HF, "Model for perianth formation in orchids" 1 : 15046-, 2015

      36 Ohmori S, "MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice" 21 : 3008-3025, 2009

      37 Zobell O, "MIKC* MADS-Box Proteins: Conserved Regulators of the Gametophytic Generation of Land Plants" 27 : 1201-1211, 2010

      38 Adamczyk BJ, "MIKC* MADS Domain Heterodimers Are Required for Pollen Maturation and Tube Growth in Arabidopsis" 149 : 1713-1723, 2009

      39 Arora R, "MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress" 8 : 242-, 2007

      40 Alvarez-Buylla ER, "MADS-box gene evolution beyond flowers: expression in pollen, endosperm, guard cells, roots and trichomes" 24 : 457-466, 2000

      41 Riechmann JL, "MADS domain proteins in plant development" 378 : 1079-1101, 1997

      42 Mondragón-Palomino M, "MADS about the evolution of orchid flowers" 13 : 51-59, 2008

      43 Eckardt NA, "MADS Monsters: Controlling Floral Organ Identity" 15 : 803-805, 2003

      44 Norman C, "Isolation and properties of cDNA clones encoding SRF, a transcription factor that binds to the c-fos serum response element" 55 : 989-1003, 1988

      45 Yu H, "Identification and characterization of three orchid MADS-box genes of the AP1/AGL9 subfamily during floral transition" 123 : 1325-1336, 2000

      46 Shu Y, "Genome-wide survey and expression analysis of the MADS-box gene family in soybean" 40 : 3901-3911, 2013

      47 Tian Y, "Genome-wide identification and analysis of the MADS-box gene family in apple" 555 : 277-290, 2015

      48 Hu L, "Genome-wide analysis of the MADS-box gene family in cucumber" 55 : 245-256, 2012

      49 Duan W, "Genome-wide analysis of the MADS-box gene family in Brassica rapa (Chinese cabbage)" 290 : 239-255, 2015

      50 Fan CM, "Genome-Wide Expression Analysis of Soybean MADS Genes Showing Potential Function in the Seed Development. (T Zhang, Ed.)" 8 : e62288-, 2013

      51 Li C, "Genome-Wide Characterization of the MADS-Box Gene Family in Radish (Raphanus sativus L.) and Assessment of Its Roles in Flowering and Floral Organogenesis" 07 : 1390-, 2016

      52 Wei B, "Genome-Wide Analysis of the MADS-Box Gene Family in Brachypodium distachyon. (S Lin, Ed.)" 9 : e84781-, 2014

      53 Diaz-Riquelme J, "Genome-Wide Analysis of MIKCC-Type MADS Box Genes in Grapevine" 149 : 354-369, 2009

      54 Bowman JL, "Genetic interactions among floral homeotic genes of Arabidopsis" 112 : 1-20, 1991

      55 Shimeld SM, "Gene function, gene networks and the fate of duplicated genes" 10 : 549-553, 1999

      56 Fornara F, "Functional Characterization of OsMADS18, a Member of the AP1/SQUA Subfamily of MADS Box Genes" 135 : 2207-2219, 2004

      57 Irish VF, "Function of the apetala-1 gene during Arabidopsis floral development" 2 : 741-753, 1990

      58 Chang YY, "Four Orchid (Oncidium Gower Ramsey) AP1/AGL9-like MADS Box Genes Show Novel Expression Patterns and Cause Different Effects on Floral Transition and Formation in Arabidopsis thaliana" 50 : 1425-1438, 2009

      59 Tsai WC, "Four DEF-Like MADS Box Genes Displayed Distinct Floral Morphogenetic Roles in Phalaenopsis Orchid" 45 : 831-844, 2004

      60 Irish VF, "Flower development and evolution: gene duplication, diversification and redeployment" 15 : 454-460, 2005

      61 Xu Y, "Floral organ identity genes in the orchid Dendrobium crumenatum" 46 : 54-68, 2006

      62 Michaels SD, "FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering" 11 : 949-956, 1999

      63 Rouse DT, "FLC, a repressor of flowering, is regulated by genes in different inductive pathways" 29 : 183-191, 2002

      64 Acri-Nunes-Miranda R, "Expression of paralogous SEP-, FUL-, AG- and STK-like MADS-box genes in wild-type and peloric Phalaenopsis flowers" 5 : 76-, 2014

      65 Southerton SG, "Eucalypt MADS-Box Genes Expressed in Developing Flowers" 118 : 365-372, 1998

      66 Wang SY, "Duplicated C-Class MADS-Box Genes Reveal Distinct Roles in Gynostemium Development in Cymbidium ensifolium (Orchidaceae)" 52 : 563-577, 2011

      67 Liu C, "Direct interaction of AGL24 and SOC1 integrates flowering signals in Arabidopsis" 135 : 1481-1491, 2008

      68 Riechmann JL, "Dimerization specificity of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA, and AGAMOUS" 93 : 4793-4798, 1996

      69 Theissen G, "Development of floral organ identity: stories from the MADS house" 4 : 75-85, 2001

      70 Sommer H, "Deficiens, a homeotic gene involved in the control of flower morphogenesis in Antirrhinum majus: the protein shows homology to transcription factors" 9 : 605-613, 1990

      71 Jofuku KD, "Control of Arabidopsis flower and seed development by the homeotic gene APETALA2" 6 : 1211-1225, 1994

      72 Mondragón-Palomino M, "Conserved differential expression of paralogous DEFICIENS- and GLOBOSA-like MADS-box genes in the flowers of Orchidaceae: refining the ‘orchid code’" 66 : 1008-1019, 2011

      73 Folter S de, "Comprehensive Interaction Map of the Arabidopsis MADS Box Transcription Factors" 17 : 1424-1433, 2005

      74 Skipper M, "Cloning and transcription analysis of an AGAMOUSand SEEDSTICK ortholog in the orchid Dendrobium thyrsiflorum (Reichb. f.)" 366 : 266-274, 2006

      75 Boss PK, "Cloning and characterisation of grapevine (Vitis vinifera L.) MADS-box genes expressed during inflorescence and berry development" 162 : 887-895, 2002

      76 Theissen G, "Classification and phylogeny of the MADS-box multigene family suggest defined roles of MADS-box gene subfamilies in the morphological evolution of eukaryotes" 43 : 484-516, 1996

      77 Fischer A, "Chromosomal mapping of the MADS-box multigene family in Zea mays reveals dispersed distribution of allelic genes as well as transposed copies" 23 : 1901-1911, 1995

      78 Chang YY, "Characterization of the possible roles for B class MADS box genes in regulation of perianth formation in orchid" 152 : 837-853, 2010

      79 Zhao T, "Characterization and expression of 42 MADS-box genes in wheat (Triticum aestivum L.)" 276 : 334-350, 2006

      80 Hsu HF, "C/D Class MADS Box Genes from Two Monocots, Orchid (Oncidium Gower Ramsey) and Lily (Lilium longiflorum), Exhibit Different Effects on Floral Transition and Formation in Arabidopsis thaliana" 51 : 102-, 2010

      81 Chen YY, "C- and D-class MADS-Box Genes from Phalaenopsis equestris (Orchidaceae) Display Functions in Gynostemium and Ovule Development" 53 : 1053-1067, 2012

      82 Pelaz S, "B and C floral organ identity functions require SEPALLATA MADS-box genes" 405 : 200-203, 2000

      83 Hepworth SR, "Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs" 21 : 4327-4337, 2002

      84 De Bodt S, "And then there were many: MADS goes genomic" 8 : 475-483, 2003

      85 Alvarez-Buylla ER, "An ancestral MADS-box gene duplication occurred before the divergence of plants and animals" 97 : 5328-5333, 2000

      86 Tapia-Lopez R, "An AGAMOUS-Related MADS-Box Gene, XAL1 (AGL12), Regulates Root Meristem Cell Proliferation and Flowering Transition in Arabidopsis" 146 : 1182-1192, 2008

      87 Portereiko MF, "AGL80 Is Required for Central Cell and Endosperm Development in Arabidopsis" 18 : 1862-1872, 2006

      88 Theissen G, "A short history of MADS-box genes in plants" 42 : 115-149, 2000

      89 Wells CE, "A genome-wide analysis of MADS-box genes in peach [Prunus persica (L.) Batsch]" 15 : 41-, 2015

      90 Meyerowitz E, "A genetic and molecular model for flower development in Arabidopsis thaliana" 157-161, 1991

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