Molecular regulation of potato tuber dormancy and sprouting: a mini-review

다국어 초록 (Multilingual Abstract)

The potato plant is among the most important and well-documented crops globally due to its role in ensuring human food security. Dormancy and sprouting behaviors of the potato tuber are among the most studied phenomena of its developmental stages. Tuber dormancy and sprouting are complex processes influenced by potato genetic background and environment, but the specific genes and molecular mechanisms controlling tuber dormancy and sprouting are still ill-defined. To develop and use engineered plants in the future, we need to better understand the molecular regulation of various physiological processes such as dormancy, sprouting, tuber growth, and flowering. This review highlight that StZEP, StNCED, StCYP and StSUT4 genes are involved in dormancy. Moreover, Ipt gene plays a major role during the release of dormancy. Sprout growth is regulated by ARF1, STIAA, and STGA20x which controls the endogenous content of IAA and GA. However, the mode of action of the main regulatory genes should be determined. This review’s objective was to combine new insights into the most critical genes expressed during potato dormancy and sprouting. The information gathered revealed that organized genetic factors drive both the potato dormancy and sprouting process. The combined assessment of multiple genes is necessary to identify the best candidate genes for genetic engineering.

참고문헌 (Reference)

1 Bachem CWB, "Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development" 9 : 745-753, 1996

2 Afek U, "Using HPP (hydrogen peroxide plus) to inhibit potato sprouting during storage" 77 : 63-65, 2000

3 Vijay P, "Use of CIPC as a potato sprout suppressant: health and environmental concerns and future options" 10 : 17-24, 2018

4 Bamberg JB, "Tuber dormancy lasting eight years in the wild potato Solanum jamesii" 87 : 226-228, 2010

5 Law RD, "Transient decreases in methylation at 5’-cCGG-3’ sequences in potato (Solanum tuberosum L.) meristem DNA during progression of tubers through dormancy precede the resumption of sprout growth" 51 : 437-447, 2003

6 Calvert CM, "Tomato annexins p34 and p35 bind to F-actin and display nucleotide phosphodiesterase activity inhibited by phospholipid binding" 8 : 333-342, 1996

7 Treviño MB, "Three drought-responsive members of the nonspecific lipid-transfer protein gene family in Lycopersicon pennellii show different developmental patterns of expression" 116 : 1461-1468, 1998

8 Banks W, "The starch of the tuber and shoots of the sprouting potato" 73 : 237-241, 1959

9 Campbell MA, "The sprout inhibitors chlorpropham and 1,4-dimethylnaphthalene elicit different transcriptional profiles and do not suppress growth through a prolongation of the dormant state" 73 : 181-189, 2010

10 Tiwari SB, "The roles of auxin response factor domains in auxin-responsive transcription" 15 : 533-543, 2003

11 Gao G, "The potato StLTPa7 gene displays a complex Ca2+- associated pattern of expression during the early stage of potato–Ralstonia solanacearum interaction" 10 : 15-27, 2009

12 Smallwood MF, "The pattern of plant annexin gene expression" 281 (281): 501-505, 1992

13 McGee E, "The inhibition of potato sprout growth by light" 110 : 399-404, 1987

14 Filatova I, "The effect of plasma treatment of seeds of some grain and legumes on their sowing quality and productivity" 56 : 139-143, 2011

15 Alam SMM, "The effect of ethylene and of inhibitors of protein and nucleic acid syntheses on dormancy break and subsequent sprout growth" 37 : 25-33, 1994

16 Gális I, "The effect of an elevated cytokinin level using the ipt gene and N6-benzyladenine on single node and intact potato plant tuberization in vitro" 14 : 143-150, 1995

17 Hanke DE, "The control of bud dormancy in potato tubers. Measurement of the seasonal pattern of changing concentrations of zeatin-cytokinins" 165 : 366-376, 1985

18 Fernie AR, "The contribution of plastidial phosphoglucomutase to the control of starch synthesis within the potato tuber" 213 : 418-426, 2001

19 Amen RD, "The concept of seed dormancy" 51 : 408-424, 1963

20 Avonce N, "The arabidopsis trehalose-6-P synthase AtTPS1 gene is a regulator of glucose, abscisic acid, and stress signaling" 136 : 3649-3659, 2004

21 Lemoine R, "Sucrose transporters in plants: update on function and structure" 1465 : 246-262, 2000

22 Lin Y, "Subtle regulation of potato acid invertase activity by a protein complex of invertase, invertase inhibitor, and sucrose nonfermenting1-related protein kinase" 168 : 1807-1819, 2015

23 Kyriakidou M, "Structural genome analysis in cultivated potato taxa" 133 : 951-966, 2020

24 Sergeeva LI, "Starch-related enzymes during potato tuber dormancy and sprouting" 59 : 556-564, 2012

25 Kloosterman B, "StGA2ox1 is induced prior to stolon swelling and controls GA levels during potato tuber development" 52 : 362-373, 2007

26 Paul V, "Sprout suppression on potato: need to look beyond CIPC for more effective and safer alternatives" 53 : 1-18, 2016

27 Machado R, "Soil salinity: effect on vegetable crop growth. Management practices to prevent and mitigate soil salinization" 3 : 30-, 2017

28 Xi D-M, "Seed-specific overexpression of antioxidant genes in Arabidopsis enhances oxidative stress tolerance during germination and early seedling growth" 8 : 796-806, 2010

29 Schreiber L, "SNPs in genes functional in starch-sugar interconversion associate with natural variation of tuber starch and sugar content of potato (Solanum tuberosum L.)" 4 : 1797-1811, 2014

30 Asalfew GK, "Review on the effect of gibberellic acid on potato (Solanum tuberosum L.) tuber dormancy breaking and sprouting" 6 : 68-78, 2016

31 Asalfew GK, "Review on the effect of gibberellic acid on potato (Solanum tuberosum L.) tuber dormancy breaking and sprouting" 6 : 68-79, 2016

32 Sonnewald S, "Regulation of potato tuber sprouting" 239 (239): 27-38, 2014

33 Muthoni J, "Regulation of potato tuber dormancy: a review review article regulation of potato tuber dormancy: a review" 8 (8): 754-759, 2014

34 Muthoni J, "Regulation of potato tuber dormancy: a review" 8 : 754-759, 2014

35 Aksenova NP, "Regulation of potato tuber dormancy and sprouting" 60 : 301-312, 2013

36 O. V. Lemeza, "Regulation of lipoxygenase gene expression in potato mini-tubers by phytohormones" Pleiades Publishing Ltd 57 (57): 715-719, 2010

37 Hartmann A, "Reactivation of meristem activity and sprout growth in potato tubers require both cytokinin and gibberellin" 155 : 776-796, 2010

38 Hartmann A, "Reactivation of meristem activity and sprout growth in potato tubers require both cytokinin and gibberellin" 155 : 776-796, 2011

39 Stermer BA, "Rapid changes in protein synthesis after application of arachidonic acid to potato tuber tissue" 35 (35): 347-356, 1989

40 Bisognin DA, "QTL analysis of tuber dormancy and sprouting in potato" 95 : 374-382, 2018

41 Diel E, "Purification and characterization of two isoenzymes of lipoxygenase from soybeans" 142 : 321-328, 1991

42 Caldas TD, "Protein chemistry and structure: chaperone properties of bacterial elongation factor EF-Tu chaperone properties of bacterial elongation factor EF-Tu" 273 : 1-6, 1998

43 Rastogi A, "Production of hydrogen peroxide and hydroxyl radical in potato tuber during the necrotrophic phase of hemibiotrophic pathogen Phytophthora infestans infection" 117 : 202-206, 2012

44 Frazier MJ, "Potato sprout inhibition and tuber quality after treatment with high-energy ionizing radiation" 83 : 31-39, 2006

45 Talei D, "Potato sprout inhibition and tuber quality after post-harvest treatment with rosemary (Rosmarinus officinalis L.) leaves and branches" 1 : 30-33, 2017

46 Kolomiets MV, "Potato lipoxygenase genes: their role in tuber formation and defense responses against pathogens" Iowa State University 1998

47 Hamm PB, "Potato cultivars differ in current season potato virus Y (PVY) infection" 87 : 19-26, 2010

48 Szalonek M, "Potato annexin STANN1 promotes drought tolerance and mitigates light stress in transgenic Solanum tuberosum L. plants" 10 : e0132683-, 2015

49 Man AL, "Potato SNF1- related protein kinase: molecular cloning, expression analysis and peptide kinase activity measurements" 34 : 31-34, 1997

50 Delaplace P, "Potato (Solanum tuberosum L.) tuber ageing induces changes in the proteome and antioxidants associated with the sprouting pattern" 60 : 1273-1288, 2009

51 Eolini F, "Polyphenol oxidase expression in potato (Solanum tuberosum) tubers inhibited to sprouting by treatment with iodine atmosphere" 65 : 2181-2187, 2004

52 Mani F, "Physiology of potato sprouting" 17 : 591-602, 2015

53 Suttle J, "Physiological regulation of potato tuber dormancy" 81 : 253-262, 2004

54 Mani F, "Physiological mechanisms for potato dormancy release and sprouting: a review" 22 : 155-174, 2014

55 Benkeblia N, "Physiological and biochemical regulation of dormancy and sprouting in potato tubers (Solanum tuberosum L.)" 2 : 54-68, 2008

56 Bisognin DA, "Physiological aging of potato tubers produced during fall and spring growing seasons and stored under different temperatures" 67 : 59-65, 2008

57 Helmkamp GM, "Phospholipid transfer proteins: Mechanism of action" 18 : 71-91, 1986

58 Manuel G, "Parental value for tuber yield in potato under high temperature environments in climate change conditions" 4 : 630-640, 2019

59 Morris WL, "Overexpression of a bacterial 1-deoxy-d-xylulose 5-phosphate synthase gene in potato tubers perturbs the isoprenoid metabolic network: implications for the control of the tuber life cycle" 57 : 3007-3018, 2006

60 Kang SG, "Nucleotide sequences of novel potato (Solanum tuberosum L.) MADS-box cDNAs and their expression in vegetative organs" 166 : 329-330, 1995

61 Wang Z, "NO and ABA interaction regulates tuber dormancy and sprouting in potato" 11 : 1-11, 2020

62 Zanetti ME, "Molecular cloning and characterization of a potato cDNA encoding a stress-regulated Aux/IAA protein" 41 : 755-760, 2003

63 Fernie AR, "Molecular and biochemical triggers of potato tuber development" 127 : 1459-1465, 2002

64 Zubko E, "Modification of cytokinin levels in potato via expression of the Petunia hybrida Sho gene" 14 : 615-618, 2005

65 Jakubowski T, "Method for the reduction of natural losses of potato tubers during their long-term storage" 12 : 1-12, 2020

66 Bahadir A, "Magnetic field effect on breaking tuber dormancy, early sprouting, seedling growth, and tuber formation in potato (Solanum tuberosum L.)" 46 : 619-625, 2020

67 Maccarrone M, "Lipoxygenases and their involvement in programmed cell death" 8 : 776-784, 2001

68 Kolomiets MV, "Lipoxygenase is involved in the control of potato tuber development" 13 : 613-626, 2001

69 Dutt S, "Key players associated with tuberization in potato: potential candidates for genetic engineering" 37 : 942-957, 2017

70 Costa A, "Isolation, characterization and expression of an elongation factor 1α gene in potato (Solanum tuberosum) cell cultures" 144 : 618-625, 2010

71 Suttle J, "Involvement of ethylene in potato microtuber dormancy" 118 : 843-848, 1998

72 Liu J, "Involvement of a banana MADSbox transcription factor gene in ethylene-induced fruit ripening" 28 : 103-111, 2009

73 Dourado C, "Innovative non-thermal technologies affecting potato tuber and fried potato quality" 88 : 274-289, 2019

74 Zhang L, "Inhibiting sprouting and decreasing α-solanine amount of stored potatoes using hydrophobic nanosilica" 6 : 10517-10525, 2018

75 Singh B, "Influence of relative humidity on weight loss in potato tubers stored at high temperatures" 8 : 141-144, 2003

76 Singh B, "Influence of relative humidity on weight loss in potato tubers stored at high temperature" 2 : 141-144, 2003

77 Dahal K, "Improving potato stress tolerance and tuber yield under a climate change scenario—a current overview" 10 : 563-, 2019

78 Lu ZH, "Impact of γ-irradiation, CIPC treatment, and storage conditions on physicochemical and nutritional properties of potato starches" 133 : 1188-1195, 2012

79 Liu B, "Identification of differentially expressed genes in potato associated with tuber dormancy release" 39 : 11277-11287, 2012

80 Aksenova NP, "Hormonal regulation of tuber formation in potato plants" 59 : 451-466, 2012

81 Mehta A, "High temperature storage of potato (Solanum tuberosum L.) for processing—a feasibility study" 38 : 263-268, 1988

82 Liu Y, "H2O2 mediates the regulation of ABA catabolism and GA biosynthesis in Arabidopsis seed dormancy and germination" 61 : 2979-2990, 2010

83 Xu X, "Genome sequence and analysis of the tuber crop potato" 475 : 189-195, 2011

84 Luthra SK, "Genetic analysis of tuber yield, processing and nutritional traits in potato (Solanum tuberosum)" 88 : 1214-1221, 2018

85 Agrimonti C, "Gene expression during transition from dormancy to sprouting in potato tubers" 95-109, 2008

86 Zakarova A, "Garlic sprouting is associated with increased antioxidant activity and concomitant changes in the metabolite profile" 62 : 1875-1880, 2014

87 Sonnewald U, "Expression of E. coli inorganic pyrophosphatase in transgenic plants alters photoassimilate partitioning" 2 : 571-581, 1992

88 Horvath BM, "Expression analysis of a family of nsLTP genes tissue specifically expressed throughout the plant and during potato tuber life cycle" 129 : 1494-1506, 2002

89 Kandil AA, "Encouragement germination of potato seed cultivars (Solanum tuberosum L.)" 8 : 223-230, 2012

90 Destefano-Beltrán L, "Effects of postharvest storage and dormancy status on ABA content, metabolism, and expression of genes involved in ABA biosynthesis and metabolism in potato tuber tissues" 61 : 687-697, 2006

91 Deligios PA, "Effects of physical, mechanical and hormonal treatments of seed-tubers on bud dormancy and plant productivity" 10 : 1-19, 2020

92 Peivastegan B, "Effect of wet storage conditions on potato tuber transcriptome, phytohormones and growth" 19 : 1-18, 2019

93 Kazami D, "Effect of storage temperature on quality of potato tubers" 47 : 851-856, 2000

94 Shine MB, "Effect of stationary magnetic field strengths of 150 and 200 mT on reactive oxygen species production in soybean" 33 : 428-437, 2012

95 Guo X, "Effect of germination on phytochemical profiles and antioxidant activity of mung bean sprouts (Vigna radiata)" 60 : 11050-11055, 2012

96 Zahoranová A, "Effect of cold atmospheric pressure plasma on the wheat seedlings vigor and on the inactivation of microorganisms on the seeds surface" 36 : 397-414, 2016

97 Rylski I, "Dual effects of ethylene on potato dormancy and sprout growth" 53 : 658-662, 1974

98 Roumeliotis E, "Downregulation of StGA3ox genes in potato results in altered GA content and affect plant and tuber growth characteristics" 170 : 1228-1234, 2013

99 Liu S, "Differential expression pattern of an acidic 9/13-lipoxygenase in flower opening and senescence and in leaf response to phloem feeders in the tea plant" 10 : 228-, 2010

100 Sonnewald U, "Control of potato tuber sprouting" 6 : 333-335, 2001

101 Dusengemungu L, "Construction of RNA interference vector and genetic transformation of potato lipoxygenase POTLX-1 gene" Lanzhou University of Technology 2019

102 Biemelt S, "Comparative analysis of abscisic acid content and starch degradation during storage of tubers harvested from different potato varieties" 43 : 371-382, 2000

103 Ronning CM, "Comparative analyses of potato expressed sequence" 131 : 419-429, 2015

104 Lewis MD, "Commercial application of CIPC sprout inhibitor to storage potatoes" University of Idaho 1997

105 Destefano-Beltrán L, "Chemically forced dormancy termination mimics natural dormancy progression in potato tuber meristems by reducing ABA content and modifying expression of genes involved in regulating ABA synthesis and metabolism" 57 : 2879-2886, 2006

106 Fidantsef AL, "Characterization of potato tuber lipoxygenase cDNAs and lipoxygenase expression in potato tubers and leaves" 102 : 257-271, 1998

107 Suttle JC, "Chapter 14—dormancy and sprouting" Elsevier Science B.V 287-309, 2007

108 Law D, "Changes in histone H3 and H4 multi-acetylation during natural and forced dormancy break in potato tubers" 120 : 642-649, 2004

109 Faivre-Rampant O, "Changes in gene expression during meristem activation processes in Solanum tuberosum with a focus on the regulation of an auxin response factor gene" 55 : 613-622, 2004

110 Sorce C, "Changes in free and conjugated IAA during dormancy and sprouting of potato tubers" 2018

111 Liu B, "Changes in ROS production and antioxidant capacity during tuber sprouting in potato" 237 : 205-213, 2017

112 Carrera E, "Changes in GA 20-oxidase gene expression strongly affect stem length, tuber induction and tuber yield of potato plants" 22 : 247-256, 2000

113 Claassens MMJ, "Carbohydrate metabolism during potato tuber dormancy and sprouting" Wageningen University 2002

114 Ma X, "CRISPR/Cas9 platforms for genome editing in plants: developments and applications" 9 : 961-974, 2016

115 Bryan JE, "Breaking dormancy of potato tubers" 16 : 9-12, 2011

116 Alamar MC, "Assuring potato tuber quality during storage: a future perspective" 8 : 1-6, 2017

117 Rykaczewska K, "Assessment of potato mother tuber vigour using the method of accelerated ageing assessment of potato mother tuber vigour using the method of accelerated ageing" 2015

118 Wegener C, "Antioxidants in different potato genotypes: effect of drought and wounding stress" 3 : 131-146, 2013

119 Debast S, "Altering trehalose- 6-phosphate content in transgenic potato tubers affects tuber growth and alters responsiveness to hormones during sprouting" 156 : 1754-1771, 2011

120 Matton DP, "Alcohol dehydrogenase gene expression in potato following elicitor and stress treatment" 14 : 775-783, 1990

121 Kumar V, "AgNO3 - a potential regulator of ethylene activity and plant growth modulator" 2009

122 Levy D, "Adaptation of potato to high temperatures and salinity—a review" 84 : 487-506, 2007

123 Han Y, "Activities and conformation changes of food enzymes induced by cold plasma: a review" 59 : 794-811, 2019

124 Finger FL, "Action of essential oils on sprouting of non-dormant potato tubers" 2018

125 Farré EM, "Acceleration of potato tuber sprouting by the expression of a bacterial pyrophosphatase" 19 : 268-, 2001

126 Zhang J, "A tomato MADS-box protein, SlCMB1, regulates ethylene biosynthesis and carotenoid accumulation during fruit ripening" 8 : 1-15, 2018

127 Kang SG, "A novel MADS-box gene of potato (Solanum tuberosum L.) expressed during the early stages of tuberization" 31 : 379-386, 1996

128 Weise A, "A new subfamily of sucrose transporters, sut4, with low affinity/high capacity localized in enucleate sieve elements of plants" 12 : 1345-1356, 2000

129 Kühn C, "A comparison of the sucrose transporter systems of different plant species" 5 : 215-232, 2003