Genetic Variability of Sorghum Charcoal Rot Pathogen (Macrophomina phaseolina) Assessed by Random DNA Markers

Rajkumar,Fakrudin Bashasab,Mahaling S Kuruvinashetti 한국식물병리학회 2007 Plant Pathology Journal Vol.23 No.2

Genetic diversity among selected isolates of Macrophomina phaseolina, a causal agent of charcoal rot (stalk rot) disease in sorghum was studied using PCRRAPD markers. A set of ten isolates, from ten different rabi sorghum genotypes representing two traditional sorghum growing situations viz., Dharwad- a transitional high rainfall region and Bijapur- a semi-arid low rainfall region in South India. From a set of 40 random primers tested, amplicon profiles of 15 were reproducible. A total of 149 amplicon levels, with an average of 9.9 bands per primer, were available for analysis, of which 148 were polymorphic (99.3%). It was possible to discriminate all the isolates with any of the 15 primers employed. UPGMA clustering of data indicated that the isolates shared varied levels of genetic similarity within a range of 0.14 to 0.72 similarity coefficient index and it was suggestive that grouping of isolates was not related to sampling location in anyway. A high level of genetic heterogeneity of 0.28 was recorded among the isolates.

ENERGY AND EXERGY ANALYSIS OF COMPACT POWER GENERATION AND HYBRID SOLAR ENERGY-WASTE HEAT-BASED TRIPLE EFFECT EJECTOR-VAPOR ABSORPTION REFRIGERATION CYCLE

RAJ KUMAR,ANIL KUMAR 대한설비공학회 2013 International Journal Of Air-Conditioning and Refr Vol.21 No.4

An NH3–H2O ejector-absorption refrigeration cycle, and an R-152a ejector refrigeration cycle are employed with a renewable energy power generator to make a proposed compact power generation and triple effect ejector-absorption refrigeration cycle. The exergy analysis of the cycle leads to a possible performance improvement. Approximately 71.69% of the input exergy is destructed due to irreversibilities in different components. Around 7.976% is available as the useful exergy output. The exhaust exergy lost to the environment is 20.33%, which is lower than the exhaust energy loss of 47.95%, while the useful energy output is 27.88%. The refrigerants used are of zero ODP and negligible GWP, and the CO2 emission of the exhaust gases is very small as compared to that of the fossil fuel run engine, hence, this cycle is favorable to the global environment. The results also show that the proposed cycle has signi¯cant higher energy and exergy effciency than the earlier investigated `triple effect refrigeration cycle' and `the combined power and ejectorrefrigeration cycle'.

On harmonic convolutions involving a vertical strip mapping

Raj Kumar,Sushma Gupta,Sukhjit Singh,Michael Dorff 대한수학회 2015 대한수학회보 Vol.52 No.1

Let $ f_\beta=h_\beta+\overline{g}{_\beta}$ and $F_a=H_a+\overline{G}_a$ be harmonic mappings obtained by shearing of analytic mappings $$h_\beta+g_\beta={1}/{(2i{\sin}\beta)}\log\left({(1+ze^{i\beta})}/{(1+ze^{-i\beta})}\right),~0<\beta<\pi$$ and $H_a+G_a={z}/{(1-z)}$, respectively. Kumar \emph{et al.} \cite{ku and gu} conjectured that if $\omega(z)=e^{i\theta}z^n (\theta\in\mathbb{R},\,\, n\in \mathbb{N})$ and $ \omega_a(z)={(a-z)}/{(1-az)},\,a\in(-1,1)$ are dilatations of $f_\beta$ and $F_a$, respectively, then $F_a\widetilde\ast f_\beta \, \in S_H^0$ and is convex in the direction of the real axis, provided $a\in \left[{(n-2)}/{(n+2)},1\right)$. They claimed to have verified the result for $n=1,2,3$ and $4$ only. In the present paper, we settle the above conjecture, in the affirmative, for $\beta=\pi/2$ and for all $n\in \mathbb{N}$.

Analytical Modelling and Simulation Analysis of Junctionless Nanotube (JL NT) MOSFET

Raj Kumar,Raj Kumar,Arvind Kumar 한국전기전자재료학회 2022 Transactions on Electrical and Electronic Material Vol.23 No.4

In this paper, an analytical model for junctionless nanotube (JLNT) MOSFET has been developed. The analytical model for minimum central potential, threshold voltage and drain current has been developed by using variable separation method. These model expressions are further applied to analyse the Short Channel Effects (SCEs) of JL NT MOSFET. The electrical performance of proposed device has been investigated by varying different process parameters such as silicon nanotube thickness, gate oxide thickness, and gate length. All the results of developed models have been validated by comparing with so obtained simulated results from genius 3D device simulator of VisualTCAD for different device parameters. JLNT MOSFET with appropriate design parameters can be further explored for circuit applications.

Effect of process parameters on the recovery of thorium tetrafl uoride prepared by hydrofl uorination of thorium oxide, and their optimization

Raj Kumar,Sonal Gupta,Sourabh Wajhal,S.K. Satpati,M.L. Sahu 한국원자력학회 2022 Nuclear Engineering and Technology Vol.54 No.5

Liquid fueled molten salt reactors (MSRs) have seen renewed interest because of their inherent safetyfeatures, higher thermal efficiency and potential for efficient thorium utilisation for power generation. Thorium fluoride is one of the salts used in liquid fueled MSRs employing TheU cycle. In the presentstudy, ThF4 was prepared by hydro-fluorination of ThO2 using anhydrous HF gas. Process parameters viz. bed depth, hydrofluorination time and hydrofluorination temperature, were optimized for the preparation of ThF4 in a static bed reactor setup. The products were characterized with X-Ray diffraction andexperimental conditions for complete conversion to ThF4 were established which also corroborated withthe yield values. Hydrofluorination of ThO2 at 450 C for half an hour at a bed depth of 6 mm gave thebest result, with a yield of about 99.36% ThF4. No unconverted oxide or any other impurity was observed. Rietveld refinement was performed on the XRD data of this ThF4, and Chi2 value of 3.54 indicated goodagreement between observed and calculated profiles.

Targeted Resequencing of 30 Genes Improves the Detection of Deleterious Mutations in South Indian Women with Breast and/or Ovarian Cancers

Rajkumar, Thangarajan,Meenakumari, Balaiah,Mani, Samson,Sridevi, Veluswami,Sundersingh, Shirley Asian Pacific Journal of Cancer Prevention 2015 Asian Pacific journal of cancer prevention Vol.16 No.13

Background: We earlier used PCR-dHPLC for mutation analysis of BRCA1 and BRCA2. In this article we report application of targeted resequencing of 30 genes involved in hereditary cancers. Materials and Methods: A total of 91 patient samples were analysed using a panel of 30 genes in the Illumina HiScan SQ system. CLCBio was used for mapping reads to the reference sequences as well as for quality-based variant detection. All the deleterious mutations were then reconfirmed using Sanger sequencing. Kaplan Meier analysis was conducted to assess the effect of deleterious mutations on disease free and overall survival. Results: Seventy four of the 91 samples had been run earlier using the PCR-dHPLC and no deleterious mutations had been detected while 17 samples were tested for the first time. A total of 24 deleterious mutations were detected, 11 in BRCA1, 4 in BRCA2, 5 in p53, one each in RAD50, RAD52, ATM and TP53BP1. Some 19 deleterious mutations were seen in patients who had been tested earlier with PCR-dHPLC [19/74] and 5/17 in the samples tested for the first time, Together with our earlier detected 21 deleterious mutations in BRCA1 and BRCA2, we now had 45 mutations in 44 patients. BRCA1c.68_69delAG;p.Glu23ValfsX16 mutation was the most common, seen in 10/44 patients. Kaplan Meier survival analysis did not show any difference in disease free and overall survival in the patients with and without deleterious mutations. Conclusions: The NGS platform is more sensitive and cost effective in detecting mutations in genes involved in hereditary breast and/or ovarian cancers.

Antioxidant Activity of Lettuce Tree (Pisonia morindifolia R.Br.) and Tamarind Tree (Tamarindus indica L.) and Their Efficacy in Peanut Oil Stability

Rajkumar Gomathi,Nagarajan Anusuya,Chinnasamy Chitravadivu,Sellamuthu Manian 한국식품과학회 2011 Food Science and Biotechnology Vol.20 No.6

Different solvent extracts of lettuce tree (Pisonia morindifolia R. Br.) and tamarind tree (Tamarindus indica L.) were tested for antioxidant activities. The extracts exhibited effective reducing power and higher radical scavenging efficacy against DPPH and hydroxyl radicals. They also showed metal chelating ability and inhibited peroxidation in the β-carotene/linoleic acid emulsion system. The extracts contained considerable levels of vitamin C,vitamin E, total phenolics, tannins, and total flavonoids estimated through standard spectrophotometric methods. As the acetone and methanol extracts of lettuce and tamarind tree recorded pronounced activities, their protective effects in stabilizing peanut oil were tested in terms of their peroxide value, free fatty acid contents, and p-anisidine values in comparison with the synthetic antioxidants butylated hydroxyanisole and butylated hydroxytoluene. Additionally, the antioxidant activity of the extract-treated oil samples and their phenolic contents were monitored to obtain a complete perspective of the influence of the phenolic compounds in oil stability. Results indicated that the selected leafy vegetables, besides acting as good sources of antioxidants, may serve as substitute for synthetic antioxidants in the stabilization of peanut oil.

Quality and Acceptability of Meat Nuggets with Fresh Aloe vera Gel

Rajkumar, V.,Verma, Arun K.,Patra, G.,Pradhan, S.,Biswas, S.,Chauhan, P.,Das, Arun K. Asian Australasian Association of Animal Productio 2016 Animal Bioscience Vol.29 No.5

Aloe vera has been used worldwide for pharmaceutical, food, and cosmetic industries due to its wide biological activities. However, quality improvement of low fat meat products and their acceptability with added Aloe vera gel (AVG) is scanty. The aim of this study was to explore the feasibility of using fresh AVG on physicochemical, textural, sensory and nutritive qualities of goat meat nuggets. The products were prepared with 0%, 2.5%, and 5% fresh AVG replacing goat meat and were analyzed for proximate composition, physicochemical and textural properties, fatty acid profile and sensory parameters. Changes in lipid oxidation and microbial growth of nuggets were also evaluated over 9 days of refrigerated storage. The results showed that AVG significantly (p<0.05) decreased the pH value and protein content of meat emulsion and nuggets. Product yield was affected at 5% level of gel. Addition of AVG in the formulation significantly affected the values of texture profile analysis. The AVG reduced the lipid oxidation and microbial growth in nuggets during storage. Sensory panelists preferred nuggets with 2.5% AVG over nuggets with 5% AVG. Therefore, AVG up to 2.5% level could be used for quality improvement in goat meat nuggets without affecting its sensorial, textural and nutritive values.

Genomic Heterogeneity of Chicken Populations in India

Rajkumar, Ullengala,Gupta, B. Ramesh,Reddy, A. Rajasekhara Asian Australasian Association of Animal Productio 2008 Animal Bioscience Vol.21 No.12

A comprehensive genome profiling study was undertaken based on automated genotyping and analysis of 20 microsatellite markers that involved 155 birds representing eight different populations. The distribution of microsatellite markers in each of these breeds helped us to decipher genetic heterogeneity, population genetic structure and evolutionary relationships of the present day chicken populations in India. All the microsatellite loci utilized for the analysis were polymorphic and reasonably informative. A total of 285 alleles were documented at 20 loci with a mean of 14.25 alleles/locus. A total of 103 alleles were found to be population/strain specific of which, only 30 per cent had a frequency of more than 10. The mean PIC values ranged from 0.39 for the locus ADL158 to 0.71 for loci MCW005 or ADL267 across the genomes and 0.55 in Dahlem Red to 0.71 in Desi (non-descript), among the populations. The overall mean expected and observed heterozygosity estimates for our populations were 0.68 and 0.64, respectively. The overall mean inbreeding coefficients (FIS) varied between -0.05 (Babcock) and 0.16 (Rhode Island Red). The pairwise FST estimates ranged from 0.06 between Aseel and Desi (non-descript) to 0.14 between Dahlem Red and Babcock. The Nei's genetic distance varied from 0.30 (WLH-IWD and WLH-IWF) to 0.80 (Dahlem Red and Babcock. Phylogenetic analysis grouped all the populations into two main clusters, representing i) the pure breeds, Dahlem Red and Rhode Island Red, and ii) the remaining six populations/strains. All the chicken populations studied were in the state of mild to moderate inbreeding except for commercial birds. A planned breeding is advised for purebreds to revive their genetic potential. High genetic diversity exists in Desi (non-descript), local birds, which can be exploited to genetically improve the birds suitable for backyard poultry.

Quality and Shelf-life of Vacuum and Aerobic Packed Chevon Patties under Refrigeration

Rajkumar, V.,Agnihotri, M.K.,Sharma, N. Asian Australasian Association of Animal Productio 2004 Animal Bioscience Vol.17 No.4

Patties were prepared using Barbari male goats meat (age about 4 yrs) and packed in HDPE under vacuum (VP) and aerobically (AP). Packed patties were stored at 4$\pm$1$^{\circ}C$ and evaluated for physico-chemical, microbiological and sensory changes on days 0, 5, 10, 15, 20 and 25. Overall mean water activity ($a_{w}$), moisture (%), fat (%), pH, TBA number and W-B shear force values (kg/$cm^{2}$) of patties were 0.983, 61.93, 18.39, 6.38, 0.150 and 0.86, respectively. Except pH that was significantly higher and TBA number significantly lower in VP patties, treatment had no significant (p>0.05) effect on other physico-chemical traits. However, storage period significantly (p<0.05) affected physico-chemical traits. Moisture (63.79%) and $a_{w}$ (0.985) were significantly (p<0.05) higher on day 25. Patties became firmer on day 20 onwards as indicated by higher W-B shear force. Though packaging method had no significant effect, storage period influenced microbial counts. The standard plate counts (SPC), which were initially log 5.98 CFU/g decreased significantly (p<0.05) on day 10 followed by steady increase and reaching log 4.89 on day 25. Almost similar trend was observed for psychrotrophic bacteria counts. Lactic acid bacteria counts declined as the storage period progressed. Coliforms, and yeast and mould counts were either not detected by the method used or were very low in numbers. All samples of AP patties revealed swollen, greasy and sticky surface with spongy texture on day 20 whereas only some of the VP patties shown such changes on day 20. Results indicated that vacuum packaging had definite advantage in preserving the sensory quality of patties than aerobic packaging but it did not help in extending the shelf-life beyond 15 days.