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      KCI등재후보

      A report on 57 unrecorded bacterial species in Korea in the classes Betaproteobacteria and Gammaproteobacteria

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      https://www.riss.kr/link?id=A105119848

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      다국어 초록 (Multilingual Abstract)

      In an investigation of indigenous prokaryotic species in Korea, a total of 57 bacterial strains assigned to the classes Betaproteobacteria and Gammaproteobacteria were isolated from diverse environments. Samples were collected from fresh water, natura...

      In an investigation of indigenous prokaryotic species in Korea, a total of 57 bacterial strains assigned to the classes Betaproteobacteria and Gammaproteobacteria were isolated from diverse environments. Samples were collected from fresh water, natural caves, soil, paddy fields, lakes, sea water, jeotgal (fermented seafood), salt flats, soil from abandoned mines, plant roots, digestive organs of both Japanese crested ibis (Nipponia nippon) and Burmese python (Python molurus bivittatus) and tidal flats. From the high 16S rRNA gene sequence similarity (>98.7%) and formation of robust phylogenetic clades with closely related species, it was determined that each strain belonged to an independent and predefined bacterial species within either the Betaproteobacteria or Gammaproteobacteria. There is no official report or publication that describes these 57 proteobacterial species in Korea. Overall, in the class Betaproteobacteria there were 16 species in 12 genera of 4 families in the order Burkholderiales and two species in two genera of one family in the order Neisseriales. Within the class Gammaproteobacteia, there were five species in four genera of four families in the order Alteromonadales, 12 species in 11 genera of one family in the order Enterobacteriales, four species in four genera of three families in the order Oceanospirillales, 11 species in four genera of two families in the order Pseudomonadales, two species in the order Vibrionales and five species in five genera of one family in the order Xanthomonadales. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source and strain IDs are described in the species description section.

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      참고문헌 (Reference)

      1 Loman, N.J., "Twenty years of bacterial genome sequencing" 13 (13): 787-794, 2015

      2 Saitou, N., "The neighbor-joining method:a new method for reconstructing phylogenetic trees" 4 (4): 406-425, 1987

      3 Thompson, J. D., "The CLUSTAL_X windows interface : flexible strategies for multiple sequence alignment aided by quality analysis tools" 25 (25): 4876-4882, 1997

      4 Kluge, A.G., "Quantitative phyletics and the evolution of anurans" 18 (18): 1-32, 1969

      5 Lauber, C. L., "Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale" 75 (75): 5111-5120, 2009

      6 Shin, N. R., "Proteobacteria : microbial signature of dysbiosis in gut microbiota" 33 (33): 496-503, 2015

      7 Lane, D.J., "Nucleic acid techniques in bacterial systematics" John Wiley and Sons 1991

      8 Tamura, K., "MEGA5 : molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods" 28 (28): 2731-2739, 2011

      9 Kim, O. S., "Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species" 62 (62): 716-721, 2012

      10 Pascault, N., "A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole" 90 (90): 563-574, 2014

      1 Loman, N.J., "Twenty years of bacterial genome sequencing" 13 (13): 787-794, 2015

      2 Saitou, N., "The neighbor-joining method:a new method for reconstructing phylogenetic trees" 4 (4): 406-425, 1987

      3 Thompson, J. D., "The CLUSTAL_X windows interface : flexible strategies for multiple sequence alignment aided by quality analysis tools" 25 (25): 4876-4882, 1997

      4 Kluge, A.G., "Quantitative phyletics and the evolution of anurans" 18 (18): 1-32, 1969

      5 Lauber, C. L., "Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale" 75 (75): 5111-5120, 2009

      6 Shin, N. R., "Proteobacteria : microbial signature of dysbiosis in gut microbiota" 33 (33): 496-503, 2015

      7 Lane, D.J., "Nucleic acid techniques in bacterial systematics" John Wiley and Sons 1991

      8 Tamura, K., "MEGA5 : molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods" 28 (28): 2731-2739, 2011

      9 Kim, O. S., "Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species" 62 (62): 716-721, 2012

      10 Pascault, N., "A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole" 90 (90): 563-574, 2014

      11 Shigematsu, T., "A culture-dependent bacterial community structure analysis based on liquid cultivation and its application to a marine environment" 293 (293): 240-247, 2009

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2028 평가예정 재인증평가 신청대상 (재인증)
      2022-01-01 평가 등재학술지 유지 (재인증) KCI등재
      2019-01-01 평가 등재학술지 선정 (계속평가) KCI등재
      2018-01-01 평가 등재후보학술지 유지 (계속평가) KCI등재후보
      2017-01-01 평가 등재후보학술지 유지 (계속평가) KCI등재후보
      2015-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0 0 0
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
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